| Detailed Information for Phage Jamun | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Ashna Siddiqui |
| Year Found | 2021 |
| Location Found | Bedford, NH United States |
| Finding Institution | University of New Hampshire at Manchester |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 18°C |
| GPS Coordinates | 42.941631 N, 71.474407 W Map |
| Discovery Notes | The sample was collected at the Target Parking lot in Bedford, New Hampshire, in the United States. The soil texture was dry, being slightly wet from earlier rain. The sample location was located near the road, and the air temperature was 64 degrees Fahrenheit (~17.7778 degrees Celsius). |
| Naming Notes | The phage name "Jamun" is taken from an Indian fried sweet called "gulab jamun." It's one of my favorite desserts/snacks, and it is round in shape, reminding me of the circular plaque shape. Additionally, "jamun" by itself is an Indian fruit, otherwise known as black plum. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 25, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 1042 |
| Genome length (bp) | 38821 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | GAGTTGCCGGGA |
| GC Content | 67.8% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AS |
| Subcluster | AS1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members | |
| Annotating Institution | University of New Hampshire at Manchester |
| Annotation Status | Awaiting_QC |
| Plaque Notes | The plaque size was around 0.12 cm in diameter. It was clear, with no cloudy rings, and the shape was similar to that of a small, irregular circle (edges seemed to be slightly "fuzzy" in appearance). |
| Morphotype | Siphoviridae |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewJamun_Draft_1 Jamun_Draft_2 Jamun_Draft_3 Jamun_Draft_4 Jamun_Draft_5 Jamun_Draft_6 Jamun_Draft_7 Jamun_Draft_8 Jamun_Draft_9 Jamun_Draft_10 Jamun_Draft_11 Jamun_Draft_12 Jamun_Draft_13 Jamun_Draft_14 Jamun_Draft_15 Jamun_Draft_16 Jamun_Draft_17 Jamun_Draft_18 Jamun_Draft_19 Jamun_Draft_20 Jamun_Draft_21 Jamun_Draft_22 Jamun_Draft_23 Jamun_Draft_24 Jamun_Draft_25 Jamun_Draft_26 Jamun_Draft_27 Jamun_Draft_28 Jamun_Draft_29 Jamun_Draft_30 Jamun_Draft_31 Jamun_Draft_32 Jamun_Draft_33 Jamun_Draft_34 Jamun_Draft_35 Jamun_Draft_36 Jamun_Draft_37 Jamun_Draft_38 Jamun_Draft_39 Jamun_Draft_40 Jamun_Draft_41 Jamun_Draft_42 Jamun_Draft_43 Jamun_Draft_44 Jamun_Draft_45 Jamun_Draft_46 Jamun_Draft_47 Jamun_Draft_48 Jamun_Draft_49 Jamun_Draft_50 Jamun_Draft_51 Jamun_Draft_52 Jamun_Draft_53 Jamun_Draft_54 Jamun_Draft_55 Jamun_Draft_56 Jamun_Draft_57 Jamun_Draft_58 Jamun_Draft_59 Jamun_Draft_60 Jamun_Draft_61 Jamun_Draft_62 Jamun_Draft_63 Jamun_Draft_64 Jamun_Draft_65 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Lysate Titer | 8.91 x 10^9 pfu/ml |
| Pitt Freezer Box# | 135 |
| Pitt Freezer Box Grid# | D12 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
