Arthrobacter phage Jamun
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Detailed Information for Phage Jamun
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByAshna Siddiqui
Year Found2021
Location FoundBedford, NH United States
Finding InstitutionUniversity of New Hampshire at Manchester
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature18°C
GPS Coordinates42.941631 N, 71.474407 W Map
Discovery NotesThe sample was collected at the Target Parking lot in Bedford, New Hampshire, in the United States. The soil texture was dry, being slightly wet from earlier rain. The sample location was located near the road, and the air temperature was 64 degrees Fahrenheit (~17.7778 degrees Celsius).
Naming NotesThe phage name "Jamun" is taken from an Indian fried sweet called "gulab jamun." It's one of my favorite desserts/snacks, and it is round in shape, reminding me of the circular plaque shape. Additionally, "jamun" by itself is an Indian fruit, otherwise known as black plum.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 25, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1042
Genome length (bp)38821
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTTGCCGGGA
GC Content67.8%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of New Hampshire at Manchester
Annotation StatusIn GenBank
Plaque NotesThe plaque size was around 0.12 cm in diameter. It was clear, with no cloudy rings, and the shape was similar to that of a small, irregular circle (edges seemed to be slightly "fuzzy" in appearance).
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Jamun_1

Jamun_2
(terminase small subunit)

Jamun_3
(terminase large subunit)

Jamun_4
(RNA binding protein)

Jamun_5
(portal protein)

Jamun_6
(capsid maturation protease)

Jamun_7
(major capsid protein)

Jamun_8

Jamun_9
(head-to-tail adaptor)

Jamun_10
(head-to-tail stopper)

Jamun_11

Jamun_12
(tail terminator)

Jamun_13
(major tail protein)

Jamun_14
(tail assembly chaperone)

Jamun_15
(tail assembly chaperone)

Jamun_16
(tape measure protein)

Jamun_17
(minor tail protein)

Jamun_18
(minor tail protein)

Jamun_19
(minor tail protein)

Jamun_20
(minor tail protein)

Jamun_21

Jamun_22

Jamun_23
(endolysin)

Jamun_24

Jamun_25
(helix-turn-helix DNA binding domain protein)

Jamun_26

Jamun_27

Jamun_28
(HNH endonuclease)

Jamun_29
(helix-turn-helix DNA binding domain protein)

Jamun_30

Jamun_31

Jamun_32

Jamun_33
(tyrosine integrase)

Jamun_34
(immunity repressor)

Jamun_35
(helix-turn-helix DNA binding domain protein)

Jamun_36
(excise)

Jamun_37
(RecE-like exonuclease)

Jamun_38
(RecT-like ssDNA binding protein)

Jamun_39
(DNA methyltransferase)

Jamun_40
(DNA methyltransferase)

Jamun_41
(helix-turn-helix DNA binding domain protein)

Jamun_42
(RusA-like resolvase)

Jamun_43
(helix-turn-helix DNA binding domain protein)

Jamun_44
(DNA methyltransferase)

Jamun_45

Jamun_46

Jamun_47

Jamun_48

Jamun_49

Jamun_50
(nucleoside deoxyribosyltransferase)

Jamun_51

Jamun_52
(ssDNA binding protein)

Jamun_53
(NucT-like nuclease)

Jamun_54

Jamun_55

Jamun_56

Jamun_57

Jamun_58

Jamun_59

Jamun_60

Jamun_61

Jamun_62
(MerR-like helix-turn-helix DNA binding domain protein)

Jamun_63
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP297550
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 8.91 x 10^9 pfu/ml
Pitt Freezer Box# 135
Pitt Freezer Box Grid# D12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload