Arthrobacter phage Orcanus
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Detailed Information for Phage Orcanus
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByMakenna Doramus
Year Found2019
Location FoundCaldwell, ID United States
Finding InstitutionCollege of Idaho
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature30°C
GPS Coordinates43.6525 N, 116.6744 W Map
Discovery NotesI got my dirt sample from the dirt outside of the dorm that I am living in at the College of Idaho. It is from the grass that is commonly walked upon.
Naming NotesFor most of my childhood the killer whale has been a large source inspiration in my life and it is something that I continue to find solace and comfort in. I decided to name my phage after an Orca because they are something that I am passionate about and I also really enjoyed this project.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 20, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2174
Genome length (bp)39404
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTCGCCGGCA
GC Content67.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionCollege of Idaho
Annotation StatusIn GenBank
Plaque NotesMy plaques were clear and large and they usually still had a large population at high dilutions.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Orcanus_1

Orcanus_2
(terminase small subunit)

Orcanus_3
(terminase large subunit)

Orcanus_4
(RNA binding protein)

Orcanus_5
(portal protein)

Orcanus_6
(capsid maturation protease)

Orcanus_7
(major capsid protein)

Orcanus_8

Orcanus_9
(head-to-tail adaptor)

Orcanus_10
(head-to-tail stopper)

Orcanus_11

Orcanus_12
(tail terminator)

Orcanus_13
(major tail protein)

Orcanus_14
(tail assembly chaperone)

Orcanus_15
(tail assembly chaperone)

Orcanus_16
(tape measure protein)

Orcanus_17
(minor tail protein)

Orcanus_18
(minor tail protein)

Orcanus_19
(minor tail protein)

Orcanus_20
(minor tail protein)

Orcanus_21

Orcanus_22

Orcanus_23
(endolysin)

Orcanus_24

Orcanus_25

Orcanus_26
(helix-turn-helix DNA-binding domain protein)

Orcanus_27

Orcanus_28

Orcanus_29
(HNH endonuclease)

Orcanus_30
(helix-turn-helix DNA-binding domain protein)

Orcanus_31

Orcanus_32

Orcanus_33

Orcanus_34
(tyrosine integrase)

Orcanus_35
(immunity repressor)

Orcanus_36
(helix-turn-helix DNA-binding domain protein)

Orcanus_37
(excise)

Orcanus_38
(RecE-like exonuclease)

Orcanus_39
(RecT-like ssDNA binding protein)

Orcanus_40
(DNA methylase)

Orcanus_41
(methyltransferase)

Orcanus_42
(helix-turn-helix DNA-binding domain protein)

Orcanus_43
(RusA-like resolvase)

Orcanus_44
(helix-turn-helix DNA-binding domain protein)

Orcanus_45
(DNA methylase)

Orcanus_46

Orcanus_47

Orcanus_48

Orcanus_49

Orcanus_50

Orcanus_51

Orcanus_52
(deoxycytidylate deaminase)

Orcanus_53
(ssDNA-binding protein)

Orcanus_54

Orcanus_55
(NucT-like nuclease)

Orcanus_56

Orcanus_57

Orcanus_58

Orcanus_59

Orcanus_60

Orcanus_61

Orcanus_62

Orcanus_63

Orcanus_64
(MerR-like helix-turn-helix DNA binding domain protein)

Orcanus_65
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT952853
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 99
Pitt Freezer Box Grid# H7
Available Files
EM PictureDownload
GenBank File for PhameratorDownload