| Detailed Information for Phage Attacne | |
| Discovery Information | |
| Isolation Host | Propionibacterium acnes ATCC 6919 |
| Found By | Fiona Bhondoekhan |
| Year Found | 2013 |
| Location Found | Los Angeles, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Unknown |
| Isolation Temperature | 37°C |
| GPS Coordinates | 34.068582 N, 118.441285 W Map |
| Discovery Notes | Phage isolation and genome annotation performed by Fiona Bhondoekhan, Joan Cheng, Anthony Hoang, Rohini Jain, and Rachelle Gonzales (UCLA). DNA preparation performed by Krisanavane Reddi (UCLA). Assembly performed by William Villella (UCLA) and confirmed by Charles Bowman (University of Pittsburgh). Quality control of annotation results performed by Jordan Moberg Parker and Dallas Mould (UCLA). |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 18, 2014 |
| Sequencing Facility | The UCLA Genotyping and Sequencing Core |
| Shotgun Sequencing Method | 454 |
| Approximate Shotgun Coverage | 393 |
| Genome length (bp) | 28876 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TCGTACGGCTT |
| GC Content | 54.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BU |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAquarius ATCC29399BC ATCC29399BT Attacne BruceLethal Cota DrParker Enochoraptor Enoki Keiki Kubed Lauchelly Leviosa LilBandit MEAK Moyashi MrAK Ouroboros P1.1 P100.1 P100A P100D P101A P104A P104B P105 P106A P106C P106I P106L P106M P107A P107C P108C P14.4 P9.1 PA6 PAD20 PAS50 Pirate Procrass1 QueenBey Rileysaurus SKKY Solid Stormborn Supernova Wizzo |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | clear, small, round plaques |
| Morphotype | Siphoviridae |
| Number of Genes | 45 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAttacne_1 Attacne_2 Attacne_3 Attacne_4 Attacne_5 Attacne_6 Attacne_7 Attacne_8 Attacne_9 Attacne_10 Attacne_11 Attacne_12 Attacne_13 Attacne_14 Attacne_15 Attacne_16 Attacne_17 Attacne_18 Attacne_19 Attacne_20 Attacne_21 Attacne_22 Attacne_23 Attacne_24 Attacne_25 Attacne_26 Attacne_27 Attacne_28 Attacne_29 Attacne_30 Attacne_31 Attacne_32 Attacne_33 Attacne_34 Attacne_35 Attacne_36 Attacne_37 Attacne_38 Attacne_39 Attacne_40 Attacne_41 Attacne_42 Attacne_43 Attacne_44 Attacne_45 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KR337651 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2013UCLAAttacneFB |
| SEA Lysate Titer | 7.00x10^8 pfu/mL |
| Date of SEA Lysate Titering | May 24, 2013 |
| Pitt Freezer Box# | 23 |
| Pitt Freezer Box Grid# | B11 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |