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Detailed Information for Phage SKKY
Discovery Information
Isolation HostPropionibacterium acnes ATCC 6919
Former namesPhagey
Found ByYouna Kang
Year Found2012
Location FoundLos Angeles, CA USA
Finding InstitutionUniversity of California, Los Angeles
ProgramUnavailable
From enriched soil sample?No
Isolation Temperature37°C
GPS Coordinates34.065 N, 118.4425 W Map
Discovery NotesPhage isolation and genome annotation performed by Karin Covarrubias, Youna Kang, Kimberly Yan, Sae Ho Song, and Kylie Wilson (UCLA). DNA preparation performed by Krisanavane Reddi (UCLA). Assembly performed by William Villella (UCLA) and confirmed by Charles Bowman (University of Pittsburgh). Quality control of annotation results performed by Jordan Moberg Parker and Dallas Mould (UCLA).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 24, 2015
Sequencing FacilityThe UCLA Genotyping and Sequencing Core
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage99
Genome length (bp)29594
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceTCGTACGGCTT
GC Content54.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBU
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesTurbid plaques with halos;
size ranged from 1-5 mm
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKR337648
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2011UCLAbruinVP
SEA Lysate Titer 1.31x10^6 pfu/ml
Date of SEA Lysate Titering Jun 4, 2012
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload