Streptomyces phage Bartholomune
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Detailed Information for Phage Bartholomune
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByArjun Nair and Mason Galler
Year Found2020
Location FoundSt. Louis, MO USA
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature29°C
GPS Coordinates38.639264 N, 90.293569 W Map
Discovery NotesSoil was taken from underneath the mulch below a group of trees. It had lots of organic matter.
Naming NotesBartholomew combined with immune, because of how resilient the phage has been, to make Bartholomune.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 11, 2021
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage106
Genome length (bp)131879
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10780 bp
GC Content50.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Number of Genes228
Number of tRNAs43
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Bartholomune_1

Bartholomune_2

Bartholomune_3

Bartholomune_4

Bartholomune_5

Bartholomune_6

Bartholomune_7
(Lsr2-like DNA bridging protein)

Bartholomune_8

Bartholomune_9

Bartholomune_10
(ParB-like nuclease domain protein)

Bartholomune_11

Bartholomune_12

Bartholomune_13

Bartholomune_14

Bartholomune_15

Bartholomune_16

Bartholomune_17

Bartholomune_18

Bartholomune_19

Bartholomune_20

Bartholomune_21

Bartholomune_22
(HNH endonuclease)

Bartholomune_23

Bartholomune_24
(ThyX-like thymidylate synthase)

Bartholomune_25

Bartholomune_26

Bartholomune_27
(hydrolase)

Bartholomune_28

Bartholomune_29

Bartholomune_30

Bartholomune_31

Bartholomune_32

Bartholomune_33

Bartholomune_34

Bartholomune_35 — tRNA
(tRNA-Thr(cgt))

Bartholomune_36
(HNH endonuclease)

Bartholomune_37
(endolysin)

Bartholomune_38

Bartholomune_39

Bartholomune_40
(glycosyltransferase)

Bartholomune_41
(ribonucleotide reductase)

Bartholomune_42
(LysM-like peptidoglycan binding protein)

Bartholomune_43

Bartholomune_44

Bartholomune_45
(portal protein)

Bartholomune_46

Bartholomune_47
(capsid maturation protease)

Bartholomune_48
(major capsid protein)

Bartholomune_49

Bartholomune_50

Bartholomune_51
(head-to-tail stopper)

Bartholomune_52

Bartholomune_53

Bartholomune_54
(major tail protein)

Bartholomune_55
(tail assembly chaperone)

Bartholomune_56
(tail assembly chaperone)

Bartholomune_57
(tape measure protein)

Bartholomune_58

Bartholomune_59
(minor tail protein)

Bartholomune_60

Bartholomune_61
(minor tail protein)

Bartholomune_62
(minor tail protein)

Bartholomune_63

Bartholomune_64

Bartholomune_65

Bartholomune_66
(HNH endonuclease)

Bartholomune_67
(metallophosphoesterase)

Bartholomune_68

Bartholomune_69

Bartholomune_70

Bartholomune_71

Bartholomune_72

Bartholomune_73

Bartholomune_74
(DnaB-like dsDNA helicase)

Bartholomune_75

Bartholomune_76
(DNA primase)

Bartholomune_77
(ssDNA binding protein)

Bartholomune_78
(DnaE-like DNA polymerase III alpha)

Bartholomune_79

Bartholomune_80
(MazG-like nucleotide pyrophosphohydrolase)

Bartholomune_81
(RecA-like DNA recombinase)

Bartholomune_82

Bartholomune_83
(holliday junction resolvase)

Bartholomune_84

Bartholomune_85

Bartholomune_86
(Cas4 family exonuclease)

Bartholomune_87

Bartholomune_88
(RuvC-like resolvase)

Bartholomune_89
(DprA-like DNA processing chain A)

Bartholomune_90
(helix-turn-helix DNA binding domain protein)

Bartholomune_91
(methyltransferase)

Bartholomune_92
(thymidylate kinase)

Bartholomune_93

Bartholomune_94

Bartholomune_95
(terminase)

Bartholomune_96
(HNH endonuclease)

Bartholomune_97

Bartholomune_98

Bartholomune_99 — tRNA
(tRNA-Gly(tcc))

Bartholomune_100 — tRNA
(tRNA-Gln(ctg))

Bartholomune_101 — tRNA
(tRNA-Trp(cca))

Bartholomune_102

Bartholomune_103

Bartholomune_104 — tRNA
(tRNA-Pro(tgg))

Bartholomune_105 — tRNA
(tRNA-Pro(tgg))

Bartholomune_106
(nucleotidyltransferase)

Bartholomune_107
(FtsK-like DNA translocase)

Bartholomune_108

Bartholomune_109 — tRNA
(tRNA-Ile(tat))

Bartholomune_110

Bartholomune_111

Bartholomune_112 — tRNA
(tRNA-Ser(gga))

Bartholomune_113

Bartholomune_114 — tRNA
(tRNA-Ser(tga))

Bartholomune_115

Bartholomune_116

Bartholomune_117

Bartholomune_118 — tRNA
(tRNA-Asp(gtc))

Bartholomune_119

Bartholomune_120

Bartholomune_121 — tRNA
(tRNA-Asp(gtc))

Bartholomune_122

Bartholomune_123

Bartholomune_124
(Ro-like RNA binding protein)

Bartholomune_125

Bartholomune_126

Bartholomune_127

Bartholomune_128

Bartholomune_129

Bartholomune_130

Bartholomune_131

Bartholomune_132 — tRNA
(tRNA-Glu(ctc))

Bartholomune_133

Bartholomune_134 — tRNA
(tRNA-Glu(ttc))

Bartholomune_135

Bartholomune_136 — tRNA
(tRNA-Val(tac))

Bartholomune_137 — tRNA
(tRNA-Leu(tag))

Bartholomune_138 — tRNA
(tRNA-Leu(tag))

Bartholomune_139 — tRNA
(tRNA-Gly(gcc))

Bartholomune_140 — tRNA
(tRNA-Arg(tct))

Bartholomune_141

Bartholomune_142

Bartholomune_143

Bartholomune_144 — tRNA
(tRNA-Ala(tgc))

Bartholomune_145 — tRNA
(tRNA-Lys(ctt))

Bartholomune_146
(peptidase)

Bartholomune_147

Bartholomune_148 — tRNA
(tRNA-Asn(gtt))

Bartholomune_149

Bartholomune_150

Bartholomune_151 — tRNA
(tRNA-Asn(gtt))

Bartholomune_152
(band-7-like membrane protein)

Bartholomune_153

Bartholomune_154

Bartholomune_155 — tRNA
(tRNA-Arg(cct))

Bartholomune_156 — tRNA
(tRNA-Ile(gat))

Bartholomune_157 — tRNA
(tRNA-Ala(ggc))

Bartholomune_158 — tRNA
(tRNA-Lys(ctt))

Bartholomune_159 — tRNA
(tRNA-Lys(ttt))

Bartholomune_160

Bartholomune_161

Bartholomune_162 — tRNA
(tRNA-Arg(tcg))

Bartholomune_163

Bartholomune_164 — tRNA
(tRNA-Met(cat))

Bartholomune_165 — tRNA
(tRNA-Met(cat))

Bartholomune_166

Bartholomune_167

Bartholomune_168

Bartholomune_169 — tRNA
(tRNA-Tyr(gta))

Bartholomune_170 — tRNA
(tRNA-His(gtg))

Bartholomune_171 — tRNA
(tRNA-Phe(gaa))

Bartholomune_172

Bartholomune_173

Bartholomune_174 — tRNA
(tRNA-Cys(gca))

Bartholomune_175 — tRNA
(tRNA-Thr(tgt))

Bartholomune_176 — tRNA
(tRNA-Thr(ggt))

Bartholomune_177 — tRNA
(tRNA-Arg(acg))

Bartholomune_178

Bartholomune_179
(DnaE-like DNA polymerase III alpha)

Bartholomune_180 — tmRNA
(Tag peptide: ANSKFAFALAA*)

Bartholomune_181

Bartholomune_182
(hydrolase)

Bartholomune_183

Bartholomune_184

Bartholomune_185
(acetyltransferase)

Bartholomune_186

Bartholomune_187 — tRNA
(tRNA-Ala(ggc))

Bartholomune_188
(HNH endonuclease)

Bartholomune_189

Bartholomune_190

Bartholomune_191

Bartholomune_192

Bartholomune_193
(RNA ligase)

Bartholomune_194

Bartholomune_195

Bartholomune_196

Bartholomune_197
(polynucleotide kinase)

Bartholomune_198

Bartholomune_199

Bartholomune_200 — tRNA
(tRNA-Leu(gag))

Bartholomune_201

Bartholomune_202

Bartholomune_203 — tRNA
(tRNA-Val(gac))

Bartholomune_204

Bartholomune_205

Bartholomune_206 — tRNA
(tRNA-Leu(caa))

Bartholomune_207

Bartholomune_208
(PD-(D/E)-XK endonuclease)

Bartholomune_209 — tRNA
(tRNA-Ser(gct))

Bartholomune_210

Bartholomune_211

Bartholomune_212

Bartholomune_213

Bartholomune_214

Bartholomune_215

Bartholomune_216

Bartholomune_217
(deoxycytidylate deaminase)

Bartholomune_218
(rIIA-like protein)

Bartholomune_219
(rIIB-like protein)

Bartholomune_220
(phosphoesterase)

Bartholomune_221

Bartholomune_222

Bartholomune_223
(WhiB family transcription factor)

Bartholomune_224

Bartholomune_225

Bartholomune_226

Bartholomune_227

Bartholomune_228

Bartholomune_229

Bartholomune_230

Bartholomune_231

Bartholomune_232 — tRNA
(tRNA-Gln(ttg))

Bartholomune_233

Bartholomune_234

Bartholomune_235

Bartholomune_236

Bartholomune_237

Bartholomune_238

Bartholomune_239

Bartholomune_240
(thioredoxin)

Bartholomune_241

Bartholomune_242

Bartholomune_243

Bartholomune_244

Bartholomune_245

Bartholomune_246

Bartholomune_247

Bartholomune_248

Bartholomune_249

Bartholomune_250

Bartholomune_251

Bartholomune_252

Bartholomune_253

Bartholomune_254

Bartholomune_255

Bartholomune_256

Bartholomune_257
(Lsr2-like DNA bridging protein)

Bartholomune_258

Bartholomune_259

Bartholomune_260
(ParB-like nuclease domain protein)

Bartholomune_261

Bartholomune_262

Bartholomune_263

Bartholomune_264

Bartholomune_265

Bartholomune_266

Bartholomune_267

Bartholomune_268

Bartholomune_269

Bartholomune_270

Bartholomune_271

Bartholomune_272
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOK310502
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload