Gordonia phage Budski
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Detailed Information for Phage Budski
Discovery Information
Isolation HostGordonia terrae 3612
Found ByEvelyn Altamirano and Jeongwon Eom
Year Found2022
Location FoundHamden, ME USA
Finding InstitutionUniversity of Maine, Honors College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates44.704964 N, 68.91611 W Map
Discovery NotesSoil selected from Butterfly bush
Naming Notesthis phage was gotten from a butterfly bush and I think it would make a good buddy (bud)
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 15, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage388
Genome length (bp)56559
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content63.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Maine, Honors College
Annotation StatusIn GenBank
Number of Genes107
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Budski_1
(HNH endonuclease)

Budski_2
(terminase small subunit)

Budski_3
(terminase large subunit)

Budski_4
(portal protein)

Budski_5

Budski_6
(scaffolding protein)

Budski_7
(major capsid protein)

Budski_8

Budski_9
(head-to-tail adaptor)

Budski_10
(head-to-tail stopper)

Budski_11

Budski_12
(tail terminator)

Budski_13
(major tail protein)

Budski_14

Budski_15
(tail assembly chaperone)

Budski_16
(tail assembly chaperone)

Budski_17

Budski_18
(tape measure protein)

Budski_19
(minor tail protein)

Budski_20
(minor tail protein)

Budski_21

Budski_22
(lysin A, L-Ala-D-Glu peptidase domain)

Budski_23
(lysin A, glycosyl hydrolase domain)

Budski_24
(holin)

Budski_25

Budski_26

Budski_27

Budski_28
(lysin B)

Budski_29
(minor tail protein)

Budski_30

Budski_31

Budski_32

Budski_33
(minor tail protein)

Budski_34
(minor tail protein)

Budski_35
(esterase)

Budski_36

Budski_37

Budski_38

Budski_39
(helix-turn-helix DNA binding domain protein)

Budski_40

Budski_41

Budski_42

Budski_43
(helix-turn-helix DNA binding domain protein)

Budski_44

Budski_45

Budski_46

Budski_47

Budski_48

Budski_49
(tyrosine integrase)

Budski_50
(helix-turn-helix DNA binding domain protein)

Budski_51
(IrrE-like protein)

Budski_52
(immunity repressor)

Budski_53
(helix-turn-helix DNA binding domain protein)

Budski_54

Budski_55

Budski_56

Budski_57

Budski_58

Budski_59

Budski_60

Budski_61

Budski_62

Budski_63
(antirepressor)

Budski_64

Budski_65

Budski_66
(excise)

Budski_67

Budski_68

Budski_69

Budski_70

Budski_71
(WhiB family transcription factor)

Budski_72
(helix-turn-helix DNA binding domain protein)

Budski_73

Budski_74
(Cas4 family exonuclease)

Budski_75

Budski_76

Budski_77

Budski_78

Budski_79

Budski_80

Budski_81

Budski_82

Budski_83

Budski_84

Budski_85

Budski_86

Budski_87
(DNA methyltransferase)

Budski_88
(helix-turn-helix DNA binding domain protein)

Budski_89

Budski_90

Budski_91

Budski_92

Budski_93
(RepA-like replication initiator)

Budski_94

Budski_95
(rusA-like resolvase)

Budski_96

Budski_97

Budski_98

Budski_99

Budski_100

Budski_101

Budski_102

Budski_103
(helix-turn-helix DNA binding domain protein)

Budski_104

Budski_105
(helix-turn-helix DNA binding domain protein)

Budski_106

Budski_107
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR159666
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 163
Pitt Freezer Box Grid# D4
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload