Gordonia phage Malisha
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Detailed Information for Phage Malisha
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRisha Musuku & Maliha Khan
Year Found2021
Location FoundPittsburgh, PA United States of America
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.4443 N, 79.9532 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage840
Genome length (bp)55452
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCTAGGCAT
GC Content62.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Has been Phamerated?Yes
Gene List

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Malisha_1
(HNH endonuclease)

Malisha_2

Malisha_3
(terminase)

Malisha_4
(portal protein)

Malisha_5

Malisha_6
(scaffolding protein)

Malisha_7
(major capsid protein)

Malisha_8

Malisha_9
(head-to-tail adaptor)

Malisha_10
(head-to-tail stopper)

Malisha_11

Malisha_12
(tail terminator)

Malisha_13
(major tail protein)

Malisha_14

Malisha_15
(endonuclease VII)

Malisha_16
(tail assembly chaperone)

Malisha_17

Malisha_18

Malisha_19
(tape measure protein)

Malisha_20
(minor tail protein)

Malisha_21
(minor tail protein)

Malisha_22

Malisha_23
(lysin A, L-Ala-D-Glu peptidase domain)

Malisha_24
(lysin A, glycosyl hydrolase domain)

Malisha_25
(holin)

Malisha_26

Malisha_27

Malisha_28

Malisha_29
(HNH endonuclease)

Malisha_30
(lysin B)

Malisha_31
(minor tail protein)

Malisha_32

Malisha_33

Malisha_34
(HNH endonuclease)

Malisha_35

Malisha_36
(glycoside hydrolase)

Malisha_37

Malisha_38

Malisha_39

Malisha_40
(helix-turn-helix DNA binding domain protein)

Malisha_41

Malisha_42

Malisha_43
(metallophosphoesterase)

Malisha_44
(tyrosine integrase)

Malisha_45
(lipoprotein)

Malisha_46
(helix-turn-helix DNA binding domain protein)

Malisha_47

Malisha_48
(IrrE-like protein)

Malisha_49

Malisha_50
(HicA-like toxin)

Malisha_51
(immunity repressor)

Malisha_52
(antirepressor)

Malisha_53
(Cro protein)

Malisha_54

Malisha_55

Malisha_56

Malisha_57

Malisha_58
(DNA methyltransferase)

Malisha_59
(holliday junction resolvase)

Malisha_60

Malisha_61

Malisha_62

Malisha_63
(excise)

Malisha_64

Malisha_65

Malisha_66

Malisha_67

Malisha_68

Malisha_69
(WhiB family transcription factor)

Malisha_70

Malisha_71
(DNA helicase)

Malisha_72
(DNA methyltransferase)

Malisha_73

Malisha_74
(Cas4 family exonuclease)

Malisha_75

Malisha_76

Malisha_77

Malisha_78

Malisha_79

Malisha_80

Malisha_81

Malisha_82

Malisha_83

Malisha_84

Malisha_85
(DNA methyltransferase)

Malisha_86

Malisha_87
(helix-turn-helix DNA binding domain protein)

Malisha_88
(RepA-like replication initiator)

Malisha_89
(helicase loader)

Malisha_90
(rusa-like resolvase)

Malisha_91

Malisha_92
(helix-turn-helix DNA binding domain protein)

Malisha_93
(G-I-Y Y-I-G endonuclease)

Malisha_94

Malisha_95

Malisha_96
(DNA binding protein)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP434458
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 141
Pitt Freezer Box Grid# E12
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload