Gordonia phage ODay
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Detailed Information for Phage ODay
Discovery Information
Isolation HostGordonia terrae 3612
Found ByZachary O'Day
Year Found2019
Location FoundPittsburgh, PA United States
Finding InstitutionUniversity of Pittsburgh
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates40.4458 N, 79.9595 W Map
Discovery NotesFound outside irvis residence hall under a bed of flowers
Naming NotesMy last name
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMar 11, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2578
Genome length (bp)58747
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content63.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDN
Subcluster--
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesPlaques were very small and clear
Has been Phamerated?Yes
Gene List

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ODay_1
(HNH endonuclease)

ODay_2
(terminase, small subunit)

ODay_3
(terminase, large subunit)

ODay_4
(portal protein)

ODay_5
(capsid maturation protease)

ODay_6
(scaffolding protein)

ODay_7
(major capsid protein)

ODay_8

ODay_9
(head-to-tail adaptor)

ODay_10
(head-to-tail stopper)

ODay_11

ODay_12
(tail terminator)

ODay_13
(major tail protein)

ODay_14
(tail assembly chaperone)

ODay_15
(tail assembly chaperone)

ODay_16

ODay_17
(helix-turn-helix DNA binding domain protein)

ODay_18
(helix-turn-helix DNA binding domain protein)

ODay_19

ODay_20

ODay_21

ODay_22
(tape measure protein)

ODay_23
(minor tail protein)

ODay_24

ODay_25
(minor tail protein)

ODay_26

ODay_27
(lysin A, protease C39 domain)

ODay_28
(lysin A, glycosyl hydrolase domain)

ODay_29

ODay_30

ODay_31

ODay_32
(lysin B)

ODay_33
(minor tail protein)

ODay_34

ODay_35

ODay_36

ODay_37
(minor tail protein)

ODay_38
(minor tail protein)

ODay_39
(minor tail protein)

ODay_40

ODay_41

ODay_42
(helix-turn-helix DNA binding domain protein)

ODay_43

ODay_44

ODay_45

ODay_46

ODay_47

ODay_48

ODay_49

ODay_50
(G-I-Y Y-I-G endonuclease)

ODay_51

ODay_52
(tyrosine integrase)

ODay_53
(helix-turn-helix DNA binding domain protein)

ODay_54
(metalloprotease)

ODay_55
(immunity repressor)

ODay_56
(helix-turn-helix DNA binding domain protein)

ODay_57

ODay_58
(methyltransferase)

ODay_59

ODay_60

ODay_61

ODay_62
(antirepressor)

ODay_63

ODay_64

ODay_65

ODay_66

ODay_67
(antitoxin in toxin/antitoxin system, RelB-like)

ODay_68

ODay_69

ODay_70

ODay_71

ODay_72
(methyltransferase)

ODay_73
(RecA-like DNA recombinase)

ODay_74

ODay_75

ODay_76
(WhiB family transcription factor)

ODay_77
(helix-turn-helix DNA binding domain protein)

ODay_78
(HNH endonuclease)

ODay_79

ODay_80

ODay_81

ODay_82

ODay_83

ODay_84

ODay_85

ODay_86

ODay_87

ODay_88

ODay_89
(helix-turn-helix DNA binding domain protein)

ODay_90

ODay_91

ODay_92

ODay_93

ODay_94

ODay_95

ODay_96
(helix-turn-helix DNA binding domain protein)

ODay_97

ODay_98
(RusA-like resolvase (endonuclease))

ODay_99

ODay_100

ODay_101

ODay_102

ODay_103

ODay_104

ODay_105

ODay_106

ODay_107

ODay_108

ODay_109

ODay_110

ODay_111

ODay_112

ODay_113
(helix-turn-helix DNA binding domain protein)

ODay_114

ODay_115

ODay_116

ODay_117

ODay_118

ODay_119

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW534375
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 114
Pitt Freezer Box Grid# H5
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload