The Actinobacteriophage Database

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Detailed Information for Phage Catdawg
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Sarah Carzo
Year Found	2011
Location Found	Radnor, PA USA
Finding Institution	Cabrini University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Unknown
Isolation Temperature	Not entered
GPS Coordinates	40.055400 N, 75.374100 W Map
Discovery Notes	Taken 1 inch deep from damp soil
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Mar 6, 2012
Sequencing Facility	David H. Murdock Research Institute
Shotgun Sequencing Method	454 Pyrosequencing
Genome length (bp)	72108
Character of genome ends	Unknown
Overhang Length	4 bases
Overhang Sequence	GTGT
GC Content	65.4%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	O
Subcluster	--
Cluster Life Cycle	Lytic
Other Cluster Members	Click to View Alkhayr Ashwin Blessica Bora Catdawg Corndog Dylan Familton Firecracker FoulBall Idergollasper JangDynasty Krili MadKillah Mori Murai NiebruSaylor Ryadel SchoolBus Schuy Shida Smooch TelAviv Vagabond Vorrps Wildflower Winget YungJamal Zakhe101
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Plaque Notes	Small plaques grew after 48 hours at 37°C.
Morphotype	Siphoviridae
Number of Genes	128
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Catdawg_1 Catdawg_2 Catdawg_3 Catdawg_4 Catdawg_5 (DNA methylase) Catdawg_6 (DNA methylase) Catdawg_7 Catdawg_8 Catdawg_9 (EndoVII protein) Catdawg_10 Catdawg_11 Catdawg_12 Catdawg_13 Catdawg_14 Catdawg_15 Catdawg_16 Catdawg_17 Catdawg_18 Catdawg_19 (DNA primase/polymerase) Catdawg_20 Catdawg_21 Catdawg_22 Catdawg_23 Catdawg_24 Catdawg_25 Catdawg_26 Catdawg_27 (HNH endonuclease) Catdawg_28 Catdawg_29 Catdawg_30 (terminase) Catdawg_31 (HNH endonuclease) Catdawg_32 (portal protein) Catdawg_33 (O-methyltransferase) Catdawg_34 (glycosyltransferase) Catdawg_35 (glycosyltransferase) Catdawg_36 (glycosyltransferase) Catdawg_37 (capsid maturation protease) Catdawg_38 Catdawg_39 (major capsid protein) Catdawg_40 Catdawg_41 Catdawg_42 Catdawg_43 (head-to-tail stopper) Catdawg_44 Catdawg_45 Catdawg_46 Catdawg_47 (major tail subunit) Catdawg_48 Catdawg_49 Catdawg_50 Catdawg_51 Catdawg_52 (tail assembly chaperone) Catdawg_53 (tail assembly chaperone) Catdawg_54 (tape measure protein) Catdawg_55 (minor tail protein) Catdawg_56 (minor tail protein) Catdawg_57 (minor tail protein) Catdawg_58 (minor tail protein) Catdawg_59 (D-Ala-D-Ala carboxypeptidase) Catdawg_60 Catdawg_61 Catdawg_62 Catdawg_63 Catdawg_64 Catdawg_65 Catdawg_66 (LysA) Catdawg_67 (LysB) Catdawg_68 (holin) Catdawg_69 Catdawg_70 Catdawg_71 Catdawg_72 Catdawg_73 (helix-turn-helix DNA binding domain protein) Catdawg_74 Catdawg_75 Catdawg_76 Catdawg_77 Catdawg_78 Catdawg_79 Catdawg_80 (DNA polymerase III beta subunit) Catdawg_81 Catdawg_82 Catdawg_83 Catdawg_84 Catdawg_85 Catdawg_86 (DNA binding domain protein) Catdawg_87 (Ku protein) Catdawg_88 Catdawg_89 Catdawg_90 (ParB-like nuclease domain protein) Catdawg_91 Catdawg_92 Catdawg_93 Catdawg_94 Catdawg_95 Catdawg_96 Catdawg_97 (AAA-ATPase) Catdawg_98 Catdawg_99 Catdawg_100 Catdawg_101 Catdawg_102 Catdawg_103 Catdawg_104 Catdawg_105 Catdawg_106 Catdawg_107 Catdawg_108 Catdawg_109 Catdawg_110 Catdawg_111 Catdawg_112 Catdawg_113 Catdawg_114 Catdawg_115 Catdawg_116 Catdawg_117 Catdawg_118 Catdawg_119 Catdawg_120 Catdawg_121 Catdawg_122 Catdawg_123 Catdawg_124 Catdawg_125 Catdawg_126 Catdawg_127 Catdawg_128
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	KF017002
Refseq Number	NC_022057
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
SEA Lysate Titer	2.0e11
Pitt Freezer Box#	68
Pitt Freezer Box Grid#	E5
Available Files
Restriction Digest Picture	Download
EM Picture	Download

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