Arthrobacter phage Chickaboom
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Detailed Information for Phage Chickaboom
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByRachel Pitt
Year Found2023
Location FoundLondonderry, NH United States
Finding InstitutionNHTI Concords Community College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates42.82175 N, 71.38248 W Map
Discovery NotesFound in dirt from a hollowed-out hole dug by chickens in their pen. 1/26/23 Temp 4C
Naming NotesChicka - chicken reference
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 7, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage819
Genome length (bp)38758
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTTGCCGGGA
GC Content67.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionNHTI Concords Community College
Annotation StatusIn GenBank
Number of Genes66
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Chickaboom_1

Chickaboom_2
(terminase, large subunit)

Chickaboom_3
(RNA binding protein)

Chickaboom_4
(portal protein)

Chickaboom_5
(capsid maturation protease)

Chickaboom_6
(major capsid protein)

Chickaboom_7

Chickaboom_8
(head-to-tail adaptor)

Chickaboom_9
(head-to-tail stopper)

Chickaboom_10

Chickaboom_11
(tail terminator)

Chickaboom_12
(major tail protein)

Chickaboom_13
(tail assembly chaperone)

Chickaboom_14
(tail assembly chaperone)

Chickaboom_15
(tape measure protein)

Chickaboom_16
(minor tail protein)

Chickaboom_17
(minor tail protein)

Chickaboom_18
(minor tail protein)

Chickaboom_19
(minor tail protein)

Chickaboom_20

Chickaboom_21

Chickaboom_22
(endolysin)

Chickaboom_23
(holin)

Chickaboom_24

Chickaboom_25
(helix-turn-helix DNA binding domain)

Chickaboom_26

Chickaboom_27

Chickaboom_28

Chickaboom_29

Chickaboom_30
(HNH endonuclease)

Chickaboom_31
(helix-turn-helix DNA binding domain)

Chickaboom_32

Chickaboom_33

Chickaboom_34

Chickaboom_35
(tyrosine integrase)

Chickaboom_36
(immunity repressor)

Chickaboom_37
(helix-turn-helix DNA binding domain)

Chickaboom_38
(excise)

Chickaboom_39
(RecE-like exonuclease)

Chickaboom_40
(RecT-like DNA pairing protein)

Chickaboom_41
(DNA methyltransferase)

Chickaboom_42
(DNA methyltransferase)

Chickaboom_43
(helix-turn-helix DNA binding domain)

Chickaboom_44
(RusA-like resolvase)

Chickaboom_45
(helix-turn-helix DNA binding domain)

Chickaboom_46
(DNA methyltransferase)

Chickaboom_47

Chickaboom_48

Chickaboom_49

Chickaboom_50

Chickaboom_51

Chickaboom_52
(nucleoside deoxyribosyltransferase)

Chickaboom_53

Chickaboom_54
(SSB protein)

Chickaboom_55
(NucT-like nuclease)

Chickaboom_56
(terminase, small subunit)

Chickaboom_57

Chickaboom_58

Chickaboom_59

Chickaboom_60

Chickaboom_61

Chickaboom_62

Chickaboom_63

Chickaboom_64

Chickaboom_65
(helix-turn-helix DNA binding domain, MerR-like)

Chickaboom_66
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ201088
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 170
Pitt Freezer Box Grid# A6
Available Files
GenBank File for PhameratorDownload