Detailed Information for Phage Chickaboom |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Rachel Pitt |
Year Found | 2023 |
Location Found | Londonderry, NH United States |
Finding Institution | NHTI Concords Community College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 42.82175 N, 71.38248 W Map |
Discovery Notes | Found in dirt from a hollowed-out hole dug by chickens in their pen. 1/26/23 Temp 4C |
Naming Notes | Chicka - chicken reference |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 7, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 819 |
Genome length (bp) | 38758 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | GAGTTGCCGGGA |
GC Content | 67.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AS |
Subcluster | AS1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | NHTI Concords Community College |
Annotation Status | In GenBank |
Number of Genes | 66 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PQ201088 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
170 |
Pitt Freezer Box Grid# |
A6 |
Available Files |
GenBank File for Phamerator | Download |