Arthrobacter phage Cote
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Detailed Information for Phage Cote
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByGabrielle Giglietti
Year Found2017
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.446788 N, 79.953814 W Map
Naming NotesI named this phage after my favorite actress Cote de Pablo, who plays Ziva David on NCIS.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 29, 2017
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage658
Genome length (bp)39044
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTTGCCGGCA
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes75
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Cote_1

Cote_2

Cote_3

Cote_4
(terminase)

Cote_5
(RNA binding protein)

Cote_6
(portal protein)

Cote_7
(capsid maturation protease)

Cote_8
(major capsid protein)

Cote_9

Cote_10
(head-to-tail adaptor)

Cote_11
(head-to-tail stopper)

Cote_12

Cote_13
(tail terminator)

Cote_14
(major tail protein)

Cote_15
(tail assembly chaperone)

Cote_16
(tail assembly chaperone)

Cote_17
(tape measure protein)

Cote_18
(minor tail protein)

Cote_19
(minor tail protein)

Cote_20
(minor tail protein)

Cote_21
(minor tail protein)

Cote_22

Cote_23

Cote_24
(endolysin)

Cote_25

Cote_26

Cote_27
(helix-turn-helix DNA-binding domain protein)

Cote_28

Cote_29

Cote_30

Cote_31

Cote_32

Cote_33
(HNH endonuclease)

Cote_34
(helix-turn-helix DNA-binding protein)

Cote_35

Cote_36

Cote_37

Cote_38
(tyrosine integrase)

Cote_39
(immunity repressor)

Cote_40
(helix-turn-helix DNA binding domain protein)

Cote_41
(helix-turn-helix DNA-binding domain protein)

Cote_42
(RecE-like exonuclease)

Cote_43
(RecT-like DNA pairing protein)

Cote_44
(helix-turn-helix DNA-binding domain protein)

Cote_45
(RusA-like resolvase)

Cote_46
(helix-turn-helix DNA binding domain protein)

Cote_47
(DNA methylase)

Cote_48
(DNA methylase)

Cote_49

Cote_50

Cote_51

Cote_52

Cote_53

Cote_54

Cote_55
(deoxycytidylate deaminase)

Cote_56

Cote_57

Cote_58
(NucT-like nuclease)

Cote_59

Cote_60

Cote_61

Cote_62

Cote_63

Cote_64

Cote_65

Cote_66

Cote_67

Cote_68

Cote_69

Cote_70

Cote_71

Cote_72

Cote_73

Cote_74
(MerR-like helix-turn-helix DNA binding domain protein)

Cote_75
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH834608
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 5
Pitt Freezer Box Grid# G12
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload