Detailed Information for Phage Crater |
Discovery Information |
Isolation Host | Gordonia terrae CAG3 |
Found By | Kylie Howell |
Year Found | 2022 |
Location Found | Manhattan, KS United States |
Finding Institution | Kansas State University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 20°C |
GPS Coordinates | 39.186 N, 96.571 W Map |
Discovery Notes | Dry thin particles with large rocks |
Naming Notes | outside of Grace's apartment on Thurston street |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2681 |
Genome length (bp) | 52539 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGTTAGGCAT |
GC Content | 63.0% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | DN |
Subcluster | DN3 |
Cluster Life Cycle | Temperate |
Lysogeny Notes | Lysogenic as shown through liquid phage release |
Other Cluster Members |
|
Annotating Institution | Kansas State University |
Annotation Status | In GenBank |
Number of Genes | 100 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR434025 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.3x10^10 pfu/ml |
Pitt Freezer Box# |
160 |
Pitt Freezer Box Grid# |
C3 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |