Detailed Information for Phage DanHam62 |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Hameeda and Daniela |
Year Found | 2024 |
Location Found | NY United States |
Finding Institution | New York Institute of Technology |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 25°C |
GPS Coordinates | 40.73652 N, 73.70929 W Map |
Discovery Notes | This was found in the backyard; there was a lot of greenery present |
Naming Notes | We named the phage after the first three alphabets of our respective names and followed by a number of our choice. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 24, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3130 |
Genome length (bp) | 38467 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | GAGTTGCCGGCA |
GC Content | 66.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AS |
Subcluster | AS3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | New York Institute of Technology |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | The plaques are very clear and small |
Morphotype | Siphoviridae |
Number of Genes | 68 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |