| Detailed Information for Phage DanHam62 | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Hameeda and Daniela |
| Year Found | 2024 |
| Location Found | NY United States |
| Finding Institution | New York Institute of Technology |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 25°C |
| GPS Coordinates | 40.73652 N, 73.70929 W Map |
| Discovery Notes | This was found in the backyard; there was a lot of greenery present |
| Naming Notes | We named the phage after the first three alphabets of our respective names and followed by a number of our choice. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 24, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 3130 |
| Genome length (bp) | 38467 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | GAGTTGCCGGCA |
| GC Content | 66.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AS |
| Subcluster | AS3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAbidatro (AS1) Basilisk (AS1) Brynnie (AS1) Chickaboom (AS1) Eesa (AS1) Galaxy (AS1) Gravel (AS1) Jamun (AS1) KendraB23 (AS1) Orcanus (AS1) Pelletreau (AS1) Ruchi (AS1) TaylorSipht (AS1) Toad24 (AS1) Vulpecula (AS1) Westrich (AS1) WileyE (AS1) Amelia (AS2) Antrice (AS2) Bedetta (AS2) Bibble12 (AS2) Colusalem (AS2) Coral (AS2) Cote (AS2) Cygnet (AS2) Daob (AS2) HannahPhantana (AS2) Jerole (AS2) Kepler (AS2) Kuleana (AS2) LittleTokyo (AS2) Lunar (AS2) Melons (AS2) OtsoOtso (AS2) Polka (AS2) Zhuangyuan (AS2) AmiCi24 (AS3) Andrew (AS3) Atlantica (AS3) Babushka (AS3) Camara (AS3) DanHam62 (AS3) Glotell (AS3) HamCheese (AS3) Juno112 (AS3) KHumphrey (AS3) Leona (AS3) PhluffyCoco (AS3) Rattail (AS3) RedFox (AS3) Renna12 (AS3) StuartMinion (AS3) |
| Annotating Institution | New York Institute of Technology |
| Annotation Status | Awaiting_QC |
| Plaque Notes | The plaques are very clear and small |
| Morphotype | Siphoviridae |
| Number of Genes | 68 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewDanHam62_1 DanHam62_2 DanHam62_3 DanHam62_4 DanHam62_5 DanHam62_6 DanHam62_7 DanHam62_8 DanHam62_9 DanHam62_10 DanHam62_11 DanHam62_12 DanHam62_13 DanHam62_14 DanHam62_15 DanHam62_16 DanHam62_17 DanHam62_18 DanHam62_19 DanHam62_20 DanHam62_21 DanHam62_22 DanHam62_23 DanHam62_24 DanHam62_25 DanHam62_26 DanHam62_27 DanHam62_28 DanHam62_29 DanHam62_30 DanHam62_31 DanHam62_32 DanHam62_33 DanHam62_34 DanHam62_35 DanHam62_36 DanHam62_37 DanHam62_38 DanHam62_39 DanHam62_40 DanHam62_41 DanHam62_42 DanHam62_43 DanHam62_44 DanHam62_45 DanHam62_46 DanHam62_47 DanHam62_48 DanHam62_49 DanHam62_50 DanHam62_51 DanHam62_52 DanHam62_53 DanHam62_54 DanHam62_55 DanHam62_56 DanHam62_57 DanHam62_58 DanHam62_59 DanHam62_60 DanHam62_61 DanHam62_62 DanHam62_63 DanHam62_64 DanHam62_65 DanHam62_66 DanHam62_67 DanHam62_68 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 212 |
| Pitt Freezer Box Grid# | D6 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
