Streptomyces phage Daubenski
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Detailed Information for Phage Daubenski
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByEmma Daubenmerkl
Year Found2018
Location FoundEvansville, IN USA
Finding InstitutionUniversity of Evansville
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature32°C
GPS Coordinates37.97 N, 87.53 W Map
Discovery NotesFound outside of Jones Hall on the University of Evansville Campus.
Naming NotesFound by Emma Daubenmerkl
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 10, 2019
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage374
Genome length (bp)133090
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10714 bp
GC Content49.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Evansville
Annotation StatusIn GenBank
Plaque NotesSmall, circular, clear
MorphotypeSiphoviridae
Number of Genes226
Number of tRNAs39
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Daubenski_1

Daubenski_2

Daubenski_3

Daubenski_4

Daubenski_5

Daubenski_6

Daubenski_7

Daubenski_8
(Lsr2-like DNA bridging protein)

Daubenski_9

Daubenski_10

Daubenski_11
(ParB-like nuclease domain protein)

Daubenski_12
(ParB-like nuclease domain protein)

Daubenski_13

Daubenski_14

Daubenski_15

Daubenski_16

Daubenski_17

Daubenski_18

Daubenski_19

Daubenski_20

Daubenski_21

Daubenski_22
(HNH endonuclease)

Daubenski_23

Daubenski_24

Daubenski_25

Daubenski_26
(ThyX-like thymidylate synthase)

Daubenski_27
(HNH endonuclease)

Daubenski_28

Daubenski_29

Daubenski_30

Daubenski_31

Daubenski_32

Daubenski_33

Daubenski_34

Daubenski_35

Daubenski_36
(nucleotidyltransferase)

Daubenski_37
(glycosyltransferase)

Daubenski_38
(glycosyltransferase)

Daubenski_39 — tRNA
(codon recognized: ACG)

Daubenski_40
(HNH endonuclease)

Daubenski_41
(endolysin)

Daubenski_42

Daubenski_43
(glycosyltransferase)

Daubenski_44
(ribonucleotide reductase)

Daubenski_45
(LysM-like peptidoglycan binding protein)

Daubenski_46

Daubenski_47

Daubenski_48
(portal protein)

Daubenski_49

Daubenski_50
(capsid maturation protease)

Daubenski_51
(major capsid protein)

Daubenski_52

Daubenski_53

Daubenski_54

Daubenski_55

Daubenski_56

Daubenski_57
(major tail protein)

Daubenski_58

Daubenski_59

Daubenski_60
(tape measure protein)

Daubenski_61

Daubenski_62
(minor tail protein)

Daubenski_63

Daubenski_64
(minor tail protein)

Daubenski_65
(minor tail protein)

Daubenski_66

Daubenski_67

Daubenski_68

Daubenski_69
(HNH endonuclease)

Daubenski_70

Daubenski_71

Daubenski_72

Daubenski_73

Daubenski_74

Daubenski_75

Daubenski_76

Daubenski_77
(DNA helicase)

Daubenski_78

Daubenski_79
(DNA primase)

Daubenski_80

Daubenski_81
(DnaE-like DNA polymerase III alpha)

Daubenski_82

Daubenski_83
(MazG-like nucleotide pyrophosphohydrolase)

Daubenski_84

Daubenski_85
(RecA-like DNA recombinase)

Daubenski_86

Daubenski_87
(Holliday junction resolvase)

Daubenski_88

Daubenski_89

Daubenski_90
(Cas4 family exonuclease)

Daubenski_91

Daubenski_92
(RuvC-like resolvase)

Daubenski_93
(DprA-like ssDNA binding protein)

Daubenski_94

Daubenski_95
(thymidylate kinase)

Daubenski_96

Daubenski_97

Daubenski_98
(terminase)

Daubenski_99
(HNH endonuclease)

Daubenski_100

Daubenski_101 — tRNA
(codon recognized: GGA)

Daubenski_102 — tRNA
(codon recognized: CAG)

Daubenski_103 — tRNA
(codon recognized: UGG)

Daubenski_104

Daubenski_105

Daubenski_106 — tRNA
(codon recognized: CCA)

Daubenski_107 — tRNA
(codon recognized: CCA)

Daubenski_108
(nucleotidyltransferase)

Daubenski_109
(FtsK-like DNA translocase)

Daubenski_110

Daubenski_111 — tRNA
(codon recognized: AUA)

Daubenski_112

Daubenski_113 — tRNA
(codon recognized: UCC)

Daubenski_114
(HNH endonuclease)

Daubenski_115

Daubenski_116 — tRNA
(codon recognized: UCA)

Daubenski_117

Daubenski_118

Daubenski_119
(hydrolase)

Daubenski_120

Daubenski_121 — tRNA
(codon recognized: GAC)

Daubenski_122 — tRNA
(codon recognized: GAC)

Daubenski_123

Daubenski_124

Daubenski_125
(Ro-like RNA binding protein)

Daubenski_126

Daubenski_127

Daubenski_128

Daubenski_129

Daubenski_130

Daubenski_131

Daubenski_132 — tRNA
(codon recognized: GAG)

Daubenski_133

Daubenski_134 — tRNA
(codon recognized: GAA)

Daubenski_135

Daubenski_136 — tRNA
(codon recognized: GUA)

Daubenski_137 — tRNA
(codon recognized: CUA)

Daubenski_138 — tRNA
(codon recognized: CUA)

Daubenski_139 — tRNA
(codon recognized: GGC)

Daubenski_140

Daubenski_141

Daubenski_142

Daubenski_143

Daubenski_144 — tRNA
(codon recognized: GCA)

Daubenski_145 — tRNA
(codon recognized: AAG)

Daubenski_146
(peptidase)

Daubenski_147

Daubenski_148 — tRNA
(codon recognized: AAC)

Daubenski_149 — tRNA
(codon recognized: AAC)

Daubenski_150

Daubenski_151

Daubenski_152 — tRNA
(codon recognized: AGG)

Daubenski_153

Daubenski_154

Daubenski_155 — tRNA
(codon recognized: GCC)

Daubenski_156 — tRNA
(codon recognized: AAG)

Daubenski_157 — tRNA
(codon recognized: AAA)

Daubenski_158 — tRNA
(codon recognized: CGA)

Daubenski_159

Daubenski_160 — tRNA
(codon recognized: AUG)

Daubenski_161 — tRNA
(codon recognized: AUG)

Daubenski_162

Daubenski_163

Daubenski_164 — tRNA
(codon recognized: CAC)

Daubenski_165 — tRNA
(codon recognized: UUC)

Daubenski_166

Daubenski_167

Daubenski_168 — tRNA
(codon recognized: UGC)

Daubenski_169 — tRNA
(codon recognized: ACA)

Daubenski_170 — tRNA
(codon recognized: ACC)

Daubenski_171

Daubenski_172 — tRNA
(codon recognized: CGU)

Daubenski_173

Daubenski_174
(DnaQ-like DNA polymerase III subunit)

Daubenski_175 — tmRNA

Daubenski_176

Daubenski_177
(hydrolase)

Daubenski_178

Daubenski_179

Daubenski_180
(acetyltransferase)

Daubenski_181

Daubenski_182

Daubenski_183

Daubenski_184

Daubenski_185

Daubenski_186

Daubenski_187
(RNA ligase)

Daubenski_188

Daubenski_189

Daubenski_190
(polynucleotide kinase)

Daubenski_191

Daubenski_192

Daubenski_193 — tRNA
(codon recognized: CUC)

Daubenski_194

Daubenski_195

Daubenski_196 — tRNA
(codon recognized: GUC)

Daubenski_197

Daubenski_198

Daubenski_199 — tRNA
(codon recognized: UUG)

Daubenski_200

Daubenski_201 — tRNA
(codon recognized: AGC)

Daubenski_202

Daubenski_203

Daubenski_204

Daubenski_205

Daubenski_206

Daubenski_207

Daubenski_208

Daubenski_209

Daubenski_210
(deoxycytidylate deaminase)

Daubenski_211

Daubenski_212
(rIIB-like protein)

Daubenski_213
(phosphoesterase)

Daubenski_214

Daubenski_215

Daubenski_216

Daubenski_217

Daubenski_218

Daubenski_219

Daubenski_220

Daubenski_221

Daubenski_222

Daubenski_223

Daubenski_224

Daubenski_225

Daubenski_226 — tRNA
(codon recognized: CAA)

Daubenski_227

Daubenski_228

Daubenski_229

Daubenski_230

Daubenski_231

Daubenski_232

Daubenski_233
(thioredoxin)

Daubenski_234

Daubenski_235

Daubenski_236

Daubenski_237

Daubenski_238

Daubenski_239

Daubenski_240

Daubenski_241

Daubenski_242

Daubenski_243

Daubenski_244

Daubenski_245

Daubenski_246

Daubenski_247

Daubenski_248

Daubenski_249

Daubenski_250

Daubenski_251

Daubenski_252
(Lsr2-like DNA bridging protein)

Daubenski_253

Daubenski_254

Daubenski_255
(ParB-like nuclease domain protein)

Daubenski_256
(ParB-like nuclease domain protein)

Daubenski_257

Daubenski_258

Daubenski_259

Daubenski_260

Daubenski_261

Daubenski_262

Daubenski_263

Daubenski_264

Daubenski_265

Daubenski_266
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN444876
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 81
Pitt Freezer Box Grid# G2
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload