Streptomyces phage Elmer
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Detailed Information for Phage Elmer
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByElla Johnson, Maria Brito, Lily Levitzky
Year Found2023
Location FoundSt. Louis, MO United States
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates38.640312 N, 90.283565 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 20, 2024
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage158
Genome length (bp)133578
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length11210 bp
GC Content47.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Number of Genes247
Number of tRNAs43
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Elmer_1

Elmer_2

Elmer_3

Elmer_4

Elmer_5

Elmer_6

Elmer_7
(Lsr2-like DNA bridging protein)

Elmer_8

Elmer_9

Elmer_10

Elmer_11

Elmer_12
(ParB-like nuclease domain protein)

Elmer_13

Elmer_14

Elmer_15

Elmer_16

Elmer_17

Elmer_18

Elmer_19

Elmer_20

Elmer_21

Elmer_22

Elmer_23

Elmer_24
(HNH endonuclease)

Elmer_25

Elmer_26

Elmer_27
(ThyX-like thymidylate synthase)

Elmer_28

Elmer_29
(MutT-like nucleotide pyrophosphohydrolase)

Elmer_30

Elmer_31

Elmer_32

Elmer_33

Elmer_34

Elmer_35

Elmer_36

Elmer_37
(adenylyltransferase)

Elmer_38
(glycosyltransferase)

Elmer_39
(glycosyltransferase)

Elmer_40 — tRNA
(tRNA-Thr(cgt))

Elmer_41
(HNH endonuclease)

Elmer_42
(glycosyltransferase)

Elmer_43

Elmer_44

Elmer_45

Elmer_46
(glycosyltransferase)

Elmer_47
(ribonucleotide reductase)

Elmer_48
(endolysin)

Elmer_49

Elmer_50

Elmer_51
(portal protein)

Elmer_52

Elmer_53
(capsid maturation protease)

Elmer_54
(major capsid protein)

Elmer_55

Elmer_56
(head-to-tail adaptor)

Elmer_57
(head-to-tail stopper)

Elmer_58

Elmer_59
(tail terminator)

Elmer_60
(major tail protein)

Elmer_61
(tail assembly chaperone)

Elmer_62

Elmer_63
(tape measure protein)

Elmer_64
(minor tail protein)

Elmer_65
(minor tail protein)

Elmer_66

Elmer_67
(minor tail protein)

Elmer_68
(minor tail protein)

Elmer_69

Elmer_70

Elmer_71

Elmer_72
(HNH endonuclease)

Elmer_73
(metallophosphatase)

Elmer_74
(holin)

Elmer_75

Elmer_76
(helix-turn-helix DNA binding domain protein)

Elmer_77

Elmer_78

Elmer_79

Elmer_80
(DNA helicase)

Elmer_81

Elmer_82
(DNA primase)

Elmer_83
(DNA binding protein)

Elmer_84
(DnaE-like DNA polymerase III alpha)

Elmer_85

Elmer_86
(MazG-like nucleotide pyrophosphohydrolase)

Elmer_87
(RecA-like DNA recombinase)

Elmer_88

Elmer_89
(Holliday junction resolvase)

Elmer_90

Elmer_91

Elmer_92

Elmer_93
(Cas4 exonuclease)

Elmer_94

Elmer_95
(RuvC-like resolvase)

Elmer_96
(DprA-like ssDNA binding protein)

Elmer_97

Elmer_98
(thymidylate kinase)

Elmer_99

Elmer_100
(terminase small subunit)

Elmer_101
(terminase large subunit)

Elmer_102
(HNH endonuclease)

Elmer_103

Elmer_104 — tRNA
(tRNA-Gly(tcc))

Elmer_105 — tRNA
(tRNA-Gln(ctg))

Elmer_106 — tRNA
(tRNA-Trp(cca))

Elmer_107

Elmer_108

Elmer_109 — tRNA
(tRNA-Pro(tgg))

Elmer_110 — tRNA
(tRNA-Pro(tgg))

Elmer_111
(nucleotidyl transferase)

Elmer_112
(FtsK-like DNA translocase)

Elmer_113

Elmer_114 — tRNA
(tRNA-Ile(tat))

Elmer_115

Elmer_116

Elmer_117 — tRNA
(tRNA-Ser(gga))

Elmer_118

Elmer_119 — tRNA
(tRNA-Ser(tga))

Elmer_120

Elmer_121

Elmer_122

Elmer_123

Elmer_124

Elmer_125 — tRNA
(tRNA-Asp(gtc))

Elmer_126

Elmer_127 — tRNA
(tRNA-Asp(gtc))

Elmer_128

Elmer_129
(Ro-like RNA binding protein)

Elmer_130

Elmer_131

Elmer_132

Elmer_133
(DNA binding protein)

Elmer_134

Elmer_135

Elmer_136

Elmer_137

Elmer_138

Elmer_139

Elmer_140 — tRNA
(tRNA-Glu(ctc))

Elmer_141

Elmer_142

Elmer_143 — tRNA
(tRNA-Glu(ttc))

Elmer_144 — tRNA
(tRNA-Val(tac))

Elmer_145

Elmer_146 — tRNA
(tRNA-Leu(tag))

Elmer_147 — tRNA
(tRNA-Leu(tag))

Elmer_148 — tRNA
(tRNA-Phe(gaa))

Elmer_149
(HNH endonuclease)

Elmer_150
(HNH endonuclease)

Elmer_151 — tRNA
(tRNA-Arg(tct))

Elmer_152

Elmer_153

Elmer_154

Elmer_155 — tRNA
(tRNA-Ala(tgc))

Elmer_156

Elmer_157 — tRNA
(tRNA-Lys(ctt))

Elmer_158
(peptidase)

Elmer_159

Elmer_160

Elmer_161

Elmer_162 — tRNA
(tRNA-Asn(gtt))

Elmer_163

Elmer_164

Elmer_165 — tRNA
(tRNA-Asn(gtt))

Elmer_166

Elmer_167

Elmer_168

Elmer_169 — tRNA
(tRNA-Arg(cct))

Elmer_170

Elmer_171

Elmer_172 — tRNA
(tRNA-Ala(ggc))

Elmer_173 — tRNA
(tRNA-Lys(ctt))

Elmer_174 — tRNA
(tRNA-Lys(ctt))

Elmer_175

Elmer_176 — tRNA
(tRNA-Lys(ttt))

Elmer_177 — tRNA
(tRNA-Arg(tcg))

Elmer_178

Elmer_179 — tRNA
(tRNA-Met(cat))

Elmer_180 — tRNA
(tRNA-Met(cat))

Elmer_181

Elmer_182

Elmer_183

Elmer_184 — tRNA
(tRNA-Tyr(gta))

Elmer_185 — tRNA
(tRNA-Tyr(gta))

Elmer_186 — tRNA
(tRNA-His(gtg))

Elmer_187 — tRNA
(tRNA-Phe(gaa))

Elmer_188

Elmer_189

Elmer_190 — tRNA
(tRNA-Cys(gca))

Elmer_191 — tRNA
(tRNA-Thr(tgt))

Elmer_192 — tRNA
(tRNA-Thr(ggt))

Elmer_193

Elmer_194 — tRNA
(tRNA-Arg(acg))

Elmer_195

Elmer_196
(DnaQ-like DNA polymerase III subunit)

Elmer_197

Elmer_198 — tmRNA
(Tag peptide: ANSNVASAYALAA*)

Elmer_199

Elmer_200

Elmer_201
(acetyltransferase)

Elmer_202

Elmer_203

Elmer_204

Elmer_205

Elmer_206

Elmer_207

Elmer_208

Elmer_209

Elmer_210
(RNA ligase)

Elmer_211

Elmer_212

Elmer_213

Elmer_214
(polynucleotide kinase)

Elmer_215

Elmer_216

Elmer_217

Elmer_218

Elmer_219 — tRNA
(tRNA-Leu(taa))

Elmer_220

Elmer_221

Elmer_222 — tRNA
(tRNA-Leu(gag))

Elmer_223

Elmer_224

Elmer_225

Elmer_226 — tRNA
(tRNA-Val(gac))

Elmer_227
(SprT-like protease)

Elmer_228

Elmer_229

Elmer_230 — tRNA
(tRNA-Leu(caa))

Elmer_231

Elmer_232

Elmer_233

Elmer_234

Elmer_235

Elmer_236

Elmer_237

Elmer_238

Elmer_239
(deoxycytidylate deaminase)

Elmer_240
(metallophosphatase)

Elmer_241

Elmer_242

Elmer_243
(WhiB family transcription factor)

Elmer_244

Elmer_245

Elmer_246

Elmer_247

Elmer_248

Elmer_249

Elmer_250

Elmer_251

Elmer_252

Elmer_253 — tRNA
(tRNA-Gln(ttg))

Elmer_254

Elmer_255

Elmer_256

Elmer_257

Elmer_258

Elmer_259

Elmer_260
(thioredoxin)

Elmer_261

Elmer_262

Elmer_263

Elmer_264

Elmer_265

Elmer_266

Elmer_267

Elmer_268

Elmer_269

Elmer_270

Elmer_271

Elmer_272

Elmer_273

Elmer_274
(Lsr2-like DNA bridging protein)

Elmer_275

Elmer_276

Elmer_277

Elmer_278

Elmer_279
(ParB-like nuclease domain protein)

Elmer_280

Elmer_281

Elmer_282

Elmer_283

Elmer_284

Elmer_285

Elmer_286

Elmer_287

Elmer_288

Elmer_289

Elmer_290

Elmer_291
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPQ362660
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 8.7 x 10^9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload