Detailed Information for Phage Glotell |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Loren Lewis |
Year Found | 2024 |
Location Found | Newnan, GA United States |
Finding Institution | Spelman College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 33.29193 N, 84.7119 W Map |
Discovery Notes | The soil sample was discovered in a backyard. The sample contained a mixture of soil and Red Georgia clay. The soil itself was on the dryer side and there was not a large amount of organic material. |
Naming Notes | The name is based off of Hansel and Gretel but includes Glo for A.globi. The extra "L" is hommage to me |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 10, 2025 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Sequencer Used | Illumina NextSeq 1000 |
Read Type | Single-end reads |
Read Length | 100 bp |
Approximate Shotgun Coverage | 2501 |
Genome length (bp) | 38515 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | GAGTTGCCGGCA |
GC Content | 66.1% |
Sequencing Notes | This sample was sequenced as part of a DOGEMS (deliberately mixed) sample. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AS |
Subcluster | AS3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Spelman College |
Annotation Status | In GenBank |
Plaque Notes | The plaque morphology is both turbid clear and fairly large in size. 0.95±0.22mm n=30 |
Morphotype | Siphoviridae |
Number of Genes | 71 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PV876937 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
216 |
Pitt Freezer Box Grid# |
A9 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |