| Detailed Information for Phage Gravel | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Rachel Owad |
| Year Found | 2024 |
| Location Found | Pittsburgh, PA United States of America |
| Finding Institution | Chatham University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 26°C |
| GPS Coordinates | 40.45 N, 79.93 W Map |
| Discovery Notes | The sample was taken a few feet away from a patch of dirt beside the parking lot behind Buhl (a building on Chatham's campus), the coordinates being 40.45/-79.93 and with an ambient temperature of 79 degrees Fahrenheit. The soil was very dry and had traces of gravel in it that made it difficult to filter, and the sample was taken from about 2 inches down. |
| Naming Notes | The sample was taken from a gravely dirt, so it was named gravel. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 2, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 4634 |
| Genome length (bp) | 40048 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | GAGTCGCCGGCA |
| GC Content | 67.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AS |
| Subcluster | AS1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAbidatro (AS1) Basilisk (AS1) Brynnie (AS1) Chickaboom (AS1) Eesa (AS1) Galaxy (AS1) Gravel (AS1) Jamun (AS1) KendraB23 (AS1) Orcanus (AS1) Pelletreau (AS1) Ruchi (AS1) TaylorSipht (AS1) Toad24 (AS1) Vulpecula (AS1) Westrich (AS1) Amelia (AS2) Antrice (AS2) Bedetta (AS2) Bibble12 (AS2) Colusalem (AS2) Coral (AS2) Cote (AS2) Daob (AS2) HannahPhantana (AS2) Jerole (AS2) Kepler (AS2) Kuleana (AS2) LittleTokyo (AS2) Lunar (AS2) Melons (AS2) Polka (AS2) Zhuangyuan (AS2) AmiCi24 (AS3) Andrew (AS3) Atlantica (AS3) Camara (AS3) Glotell (AS3) HamCheese (AS3) Juno112 (AS3) KHumphrey (AS3) Leona (AS3) PhluffyCoco (AS3) Rattail (AS3) RedFox (AS3) Renna12 (AS3) StuartMinion (AS3) |
| Annotating Institution | Chatham University |
| Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
| Number of Genes | 75 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewGravel_1 Gravel_2 Gravel_3 Gravel_4 Gravel_5 Gravel_6 Gravel_7 Gravel_8 Gravel_9 Gravel_10 Gravel_11 Gravel_12 Gravel_13 Gravel_14 Gravel_15 Gravel_16 Gravel_17 Gravel_18 Gravel_19 Gravel_20 Gravel_21 Gravel_22 Gravel_23 Gravel_24 Gravel_25 Gravel_26 Gravel_27 Gravel_28 Gravel_29 Gravel_30 Gravel_31 Gravel_32 Gravel_33 Gravel_34 Gravel_35 Gravel_36 Gravel_37 Gravel_38 Gravel_39 Gravel_40 Gravel_41 Gravel_42 Gravel_43 Gravel_44 Gravel_45 Gravel_46 Gravel_47 Gravel_48 Gravel_49 Gravel_50 Gravel_51 Gravel_52 Gravel_53 Gravel_54 Gravel_55 Gravel_56 Gravel_57 Gravel_58 Gravel_59 Gravel_60 Gravel_61 Gravel_62 Gravel_63 Gravel_64 Gravel_65 Gravel_66 Gravel_67 Gravel_68 Gravel_69 Gravel_70 Gravel_71 Gravel_72 Gravel_73 Gravel_74 Gravel_75 |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Not in Pitt Archives |