Gordonia phage Jablanski
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Detailed Information for Phage Jablanski
Discovery Information
Isolation HostGordonia terrae 3612
Found ByRichard Conboy and Frank D’Amato
Year Found2019
Location FoundNewburgh, NY United States
Finding InstitutionMount Saint Mary College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates41.5131 N, 74.0125 W Map
Discovery NotesWe found our phage behind a dumpster runoff behind our school. It was a cloudy day and the day before it rained a lot. Having the hill behind the fill wet it gave the dirt a lot of phages.
Naming NotesWe likes the way the phage name rolls off the tongue.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1499
Genome length (bp)53521
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGTACGGCAT
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterCY
Subcluster--
Cluster Life CycleTemperate
Lysogeny NotesPatch test and phage release assay indicate this is a lysogen.
Other Cluster Members
Annotating InstitutionMount Saint Mary College
Annotation StatusIn GenBank
Plaque Noteswe liked the way it sounded as we made it up.
Number of Genes82
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Jablanski_1
(terminase small subunit)

Jablanski_2
(terminase large subunit)

Jablanski_3
(portal protein)

Jablanski_4
(capsid maturation protease)

Jablanski_5
(scaffolding protein)

Jablanski_6
(capsid decoration protein)

Jablanski_7
(major capsid protein)

Jablanski_8

Jablanski_9
(head-to-tail adaptor)

Jablanski_10
(head-to-tail stopper)

Jablanski_11

Jablanski_12

Jablanski_13
(tail terminator)

Jablanski_14
(major tail protein)

Jablanski_15
(tail assembly chaperone)

Jablanski_16
(tail assembly chaperone)

Jablanski_17
(lipoprotein)

Jablanski_18
(tape measure protein)

Jablanski_19
(minor tail protein)

Jablanski_20
(minor tail protein)

Jablanski_21

Jablanski_22
(lysin A, protease M15 domain)

Jablanski_23

Jablanski_24
(lysin A, glycosyl hydrolase domain)

Jablanski_25
(holin)

Jablanski_26

Jablanski_27

Jablanski_28
(lysin B)

Jablanski_29
(minor tail protein)

Jablanski_30

Jablanski_31
(minor tail protein)

Jablanski_32

Jablanski_33

Jablanski_34
(tyrosine integrase)

Jablanski_35

Jablanski_36
(RelB-like antitoxin)

Jablanski_37
(RelE-like toxin)

Jablanski_38

Jablanski_39
(tyrosine integrase)

Jablanski_40
(helix-turn-helix DNA binding domain protein)

Jablanski_41
(peptidase)

Jablanski_42

Jablanski_43
(methyltransferase)

Jablanski_44

Jablanski_45

Jablanski_46
(immunity repressor)

Jablanski_47

Jablanski_48
(antirepressor)

Jablanski_49

Jablanski_50

Jablanski_51

Jablanski_52

Jablanski_53

Jablanski_54

Jablanski_55

Jablanski_56

Jablanski_57

Jablanski_58

Jablanski_59
(exonuclease)

Jablanski_60
(RecT-like ssDNA binding protein)

Jablanski_61

Jablanski_62

Jablanski_63

Jablanski_64
(DnaJ-like chaperone)

Jablanski_65

Jablanski_66

Jablanski_67

Jablanski_68

Jablanski_69

Jablanski_70

Jablanski_71

Jablanski_72

Jablanski_73
(G-I-Y Y-I-G endonuclease)

Jablanski_74
(RepA-like replication initiator)

Jablanski_75

Jablanski_76

Jablanski_77
(RusA-like resolvase)

Jablanski_78

Jablanski_79

Jablanski_80
(helix-turn-helix DNA binding domain protein)

Jablanski_81

Jablanski_82
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMT521999
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 6 x 10^10
Pitt Freezer Box# 108
Pitt Freezer Box Grid# H6
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload