| Detailed Information for Phage Jacko |
| Discovery Information |
| Isolation Host | Microbacterium paraoxydans NRRL B-14843 |
| Found By | Jon Duclos and Rudy Lipovetz |
| Year Found | 2017 |
| Location Found | Hudson, WI USA |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 28°C |
| GPS Coordinates | 44.984533 N, 92.7545 W Map |
| Discovery Notes | Soil found in Dr. Klyczek's compost pile, sample came from bottom of pile. Compost was well broken down. Soil was semi-moist, loose and contained partially decomposed leaves. Compost contained yard waste and vegetable scraps. |
| Naming Notes | The name "Jacko" is short for jack-o-lantern. It is also a character in a story. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 8, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Genome length (bp) | 61421 |
| Character of genome ends | Unknown |
| Overhang Length | 3028 bases |
| GC Content | 64.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | ED |
| Subcluster | ED1 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Wisconsin-River Falls |
| Annotation Status | In GenBank |
| Plaque Notes | medium to large clear plaques, no halo |
| Morphotype | Siphoviridae |
| Number of Genes | 114 |
| Number of tRNAs | 2 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH399779 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
2.035 x 10^8 |
| Pitt Freezer Box# |
69 |
| Pitt Freezer Box Grid# |
G4 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
