Streptomyces phage Jay2Jay
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Detailed Information for Phage Jay2Jay
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByJared Luchetta
Year Found2013
Location FoundTresckow, PA USA
Finding InstitutionWilkes University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.928611 N, 75.961111 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 16, 2014
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage5315
Genome length (bp)133531
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length11438 bp
End Determination NotesBuildups of reads in the Illumina sequencing data, flanking a region of approximately double the coverage of the rest of the genome.
GC Content49.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes235
Number of tRNAs45
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Jay2Jay_1

Jay2Jay_2

Jay2Jay_3

Jay2Jay_4

Jay2Jay_5

Jay2Jay_6

Jay2Jay_7

Jay2Jay_8

Jay2Jay_9
(Lsr2-like DNA bridging protein)

Jay2Jay_10

Jay2Jay_11
(ParB-like nuclease domain protein)

Jay2Jay_12

Jay2Jay_13
(ParB-like nuclease domain protein)

Jay2Jay_14

Jay2Jay_15

Jay2Jay_16

Jay2Jay_17

Jay2Jay_18

Jay2Jay_19

Jay2Jay_20

Jay2Jay_21

Jay2Jay_22

Jay2Jay_23

Jay2Jay_24

Jay2Jay_25

Jay2Jay_26
(HNH endonuclease)

Jay2Jay_27

Jay2Jay_28
(ThyX-like thymidylate synthase)

Jay2Jay_29

Jay2Jay_30

Jay2Jay_31

Jay2Jay_32

Jay2Jay_33

Jay2Jay_34

Jay2Jay_35

Jay2Jay_36

Jay2Jay_37
(nucleotidyltransferase)

Jay2Jay_38
(glycosyltransferase)

Jay2Jay_39
(glycosyltransferase)

Jay2Jay_40 — tRNA
(tRNA-Thr(cgt))

Jay2Jay_41
(HNH endonuclease)

Jay2Jay_42
(endolysin)

Jay2Jay_43

Jay2Jay_44

Jay2Jay_45

Jay2Jay_46
(glycosyltransferase)

Jay2Jay_47
(ribonucleotide reductase)

Jay2Jay_48
(HNH endonuclease)

Jay2Jay_49
(LysM-like peptidoglycan binding protein)

Jay2Jay_50

Jay2Jay_51

Jay2Jay_52
(portal protein)

Jay2Jay_53

Jay2Jay_54
(capsid maturation protease)

Jay2Jay_55
(major capsid protein)

Jay2Jay_56

Jay2Jay_57

Jay2Jay_58

Jay2Jay_59

Jay2Jay_60

Jay2Jay_61

Jay2Jay_62

Jay2Jay_63

Jay2Jay_64
(tape measure protein)

Jay2Jay_65

Jay2Jay_66
(minor tail protein)

Jay2Jay_67

Jay2Jay_68
(minor tail protein)

Jay2Jay_69
(minor tail protein)

Jay2Jay_70

Jay2Jay_71

Jay2Jay_72

Jay2Jay_73
(HNH endonuclease)

Jay2Jay_74
(metallophosphoesterase)

Jay2Jay_75

Jay2Jay_76

Jay2Jay_77

Jay2Jay_78

Jay2Jay_79

Jay2Jay_80

Jay2Jay_81
(DNA helicase)

Jay2Jay_82
(DNA primase)

Jay2Jay_83

Jay2Jay_84
(DnaE-like DNA polymerase III (alpha))

Jay2Jay_85

Jay2Jay_86
(MazG-like nucleotide pyrophosphohydrolase)

Jay2Jay_87
(RecA-like DNA recombinase)

Jay2Jay_88

Jay2Jay_89
(holliday junction resolvase)

Jay2Jay_90

Jay2Jay_91

Jay2Jay_92
(Cas4 family exonuclease)

Jay2Jay_93

Jay2Jay_94
(RuvC-like resolvase)

Jay2Jay_95
(DprA-like ssDNA binding protein)

Jay2Jay_96

Jay2Jay_97
(thymidylate kinase)

Jay2Jay_98

Jay2Jay_99

Jay2Jay_100
(terminase)

Jay2Jay_101
(HNH endonuclease)

Jay2Jay_102

Jay2Jay_103 — tRNA
(tRNA-Gly(tcc))

Jay2Jay_104 — tRNA
(tRNA-Gln(ctg))

Jay2Jay_105 — tRNA
(tRNA-Trp(cca))

Jay2Jay_106

Jay2Jay_107

Jay2Jay_108 — tRNA
(tRNA-Pro(tgg))

Jay2Jay_109 — tRNA
(tRNA-Pro(tgg))

Jay2Jay_110
(nucleotidyltransferase)

Jay2Jay_111
(FtsK-like DNA translocase)

Jay2Jay_112

Jay2Jay_113 — tRNA
(tRNA-Ile(tat))

Jay2Jay_114

Jay2Jay_115

Jay2Jay_116 — tRNA
(tRNA-Ser(gga))

Jay2Jay_117

Jay2Jay_118 — tRNA
(tRNA-Ser(tga))

Jay2Jay_119

Jay2Jay_120

Jay2Jay_121
(hydrolase)

Jay2Jay_122

Jay2Jay_123 — tRNA
(tRNA-Asp(gtc))

Jay2Jay_124

Jay2Jay_125

Jay2Jay_126

Jay2Jay_127 — tRNA
(tRNA-Asp(gtc))

Jay2Jay_128

Jay2Jay_129

Jay2Jay_130
(Ro-like RNA binding protein)

Jay2Jay_131

Jay2Jay_132

Jay2Jay_133

Jay2Jay_134

Jay2Jay_135

Jay2Jay_136

Jay2Jay_137 — tRNA
(tRNA-Glu(ctc))

Jay2Jay_138 — tRNA
(tRNA-Glu(ttc))

Jay2Jay_139

Jay2Jay_140 — tRNA
(tRNA-Val(tac))

Jay2Jay_141 — tRNA
(tRNA-Leu(tag))

Jay2Jay_142 — tRNA
(tRNA-Leu(tag))

Jay2Jay_143 — tRNA
(tRNA-Gly(gcc))

Jay2Jay_144 — tRNA
(tRNA-Arg(tct))

Jay2Jay_145

Jay2Jay_146

Jay2Jay_147

Jay2Jay_148

Jay2Jay_149 — tRNA
(tRNA-Ala(tgc))

Jay2Jay_150

Jay2Jay_151 — tRNA
(tRNA-Lys(ctt))

Jay2Jay_152

Jay2Jay_153

Jay2Jay_154 — tRNA
(tRNA-Asn(gtt))

Jay2Jay_155

Jay2Jay_156

Jay2Jay_157 — tRNA
(tRNA-Asn(gtt))

Jay2Jay_158

Jay2Jay_159

Jay2Jay_160 — tRNA
(tRNA-Arg(cct))

Jay2Jay_161

Jay2Jay_162 — tRNA
(tRNA-Ile(gat))

Jay2Jay_163 — tRNA
(tRNA-Ala(ggc))

Jay2Jay_164 — tRNA
(tRNA-Lys(ctt))

Jay2Jay_165 — tRNA
(tRNA-Lys(ttt))

Jay2Jay_166 — tRNA
(tRNA-Arg(tcg))

Jay2Jay_167

Jay2Jay_168 — tRNA
(tRNA-Met(cat))

Jay2Jay_169 — tRNA
(tRNA-Met(cat))

Jay2Jay_170

Jay2Jay_171

Jay2Jay_172

Jay2Jay_173 — tRNA
(tRNA-Tyr(gta))

Jay2Jay_174 — tRNA
(tRNA-Tyr(gta))

Jay2Jay_175 — tRNA
(tRNA-His(gtg))

Jay2Jay_176 — tRNA
(tRNA-His(gtg))

Jay2Jay_177 — tRNA
(tRNA-Phe(gaa))

Jay2Jay_178

Jay2Jay_179

Jay2Jay_180 — tRNA
(tRNA-Cys(gca))

Jay2Jay_181 — tRNA
(tRNA-Thr(tgt))

Jay2Jay_182 — tRNA
(tRNA-Thr(ggt))

Jay2Jay_183

Jay2Jay_184 — tRNA
(tRNA-Arg(acg))

Jay2Jay_185

Jay2Jay_186
(DnaQ-like DNA polymerase III subunit)

Jay2Jay_187 — tmRNA

Jay2Jay_188

Jay2Jay_189
(hydrolase)

Jay2Jay_190

Jay2Jay_191

Jay2Jay_192

Jay2Jay_193

Jay2Jay_194 — tRNA
(tRNA-Ala(ggc))

Jay2Jay_195

Jay2Jay_196

Jay2Jay_197

Jay2Jay_198

Jay2Jay_199
(RNA ligase)

Jay2Jay_200

Jay2Jay_201

Jay2Jay_202
(polynucleotide kinase)

Jay2Jay_203

Jay2Jay_204

Jay2Jay_205 — tRNA
(tRNA-Leu(gag))

Jay2Jay_206

Jay2Jay_207

Jay2Jay_208 — tRNA
(tRNA-Val(gac))

Jay2Jay_209

Jay2Jay_210

Jay2Jay_211 — tRNA
(tRNA-Leu(caa))

Jay2Jay_212

Jay2Jay_213 — tRNA
(tRNA-ser(gct))

Jay2Jay_214

Jay2Jay_215

Jay2Jay_216

Jay2Jay_217

Jay2Jay_218

Jay2Jay_219

Jay2Jay_220

Jay2Jay_221

Jay2Jay_222
(deoxycytidylate deaminase)

Jay2Jay_223

Jay2Jay_224
(rIIB-like protein)

Jay2Jay_225
(phosphoesterase)

Jay2Jay_226

Jay2Jay_227

Jay2Jay_228

Jay2Jay_229
(WhiB family transcription factor)

Jay2Jay_230

Jay2Jay_231

Jay2Jay_232

Jay2Jay_233

Jay2Jay_234

Jay2Jay_235

Jay2Jay_236

Jay2Jay_237

Jay2Jay_238

Jay2Jay_239 — tRNA
(tRNA-Gln(ttg))

Jay2Jay_240

Jay2Jay_241

Jay2Jay_242

Jay2Jay_243

Jay2Jay_244

Jay2Jay_245

Jay2Jay_246

Jay2Jay_247
(thioredoxin)

Jay2Jay_248

Jay2Jay_249

Jay2Jay_250

Jay2Jay_251

Jay2Jay_252

Jay2Jay_253

Jay2Jay_254

Jay2Jay_255

Jay2Jay_256

Jay2Jay_257

Jay2Jay_258

Jay2Jay_259

Jay2Jay_260

Jay2Jay_261

Jay2Jay_262

Jay2Jay_263

Jay2Jay_264
(Lsr2-like DNA bridging protein)

Jay2Jay_265

Jay2Jay_266
(ParB-like nuclease domain protein)

Jay2Jay_267

Jay2Jay_268
(ParB-like nuclease domain protein)

Jay2Jay_269

Jay2Jay_270

Jay2Jay_271

Jay2Jay_272

Jay2Jay_273

Jay2Jay_274

Jay2Jay_275

Jay2Jay_276

Jay2Jay_277

Jay2Jay_278

Jay2Jay_279

Jay2Jay_280

Jay2Jay_281
(HNH endonuclease)

Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKM652554
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 124
Pitt Freezer Box Grid# E1