Streptomyces phage JimJam
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Detailed Information for Phage JimJam
Discovery Information
Isolation HostStreptomyces griseus ATCC 10137
Found ByMax Harad and Rodrigo Becerra
Year Found2019
Location FoundEvansville, IN United States
Finding InstitutionUniversity of Evansville
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates37.971944 N, 87.532222 W Map
Discovery NotesSoil was collected about an inch below the ground
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 14, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage950
Genome length (bp)134078
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length12542 bp
GC Content49.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionPurdue University
Annotation StatusIn GenBank
Plaque NotesPlaques are small, clear, circular, and have well-defined boundaries.
Number of Genes251
Number of tRNAs43
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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JimJam_1

JimJam_2

JimJam_3

JimJam_4

JimJam_5

JimJam_6

JimJam_7
(Lsr2-like DNA bridging protein)

JimJam_8

JimJam_9

JimJam_10

JimJam_11

JimJam_12

JimJam_13
(ParB-like nuclease domain protein)

JimJam_14

JimJam_15

JimJam_16

JimJam_17

JimJam_18

JimJam_19

JimJam_20

JimJam_21

JimJam_22

JimJam_23

JimJam_24

JimJam_25

JimJam_26

JimJam_27
(HNH endonuclease)

JimJam_28

JimJam_29

JimJam_30
(ThyX-like thymidylate synthase)

JimJam_31

JimJam_32

JimJam_33

JimJam_34

JimJam_35

JimJam_36

JimJam_37

JimJam_38

JimJam_39 — tRNA
(tRNA-Thr(cgt))

JimJam_40
(HNH endonuclease)

JimJam_41
(endolysin)

JimJam_42

JimJam_43

JimJam_44
(glycosyltransferase)

JimJam_45
(ribonucleotide reductase)

JimJam_46
(endolysin, N-acetylmuramoyl-L-alanine amidase domain)

JimJam_47

JimJam_48

JimJam_49
(portal protein)

JimJam_50

JimJam_51
(capsid maturation protease)

JimJam_52
(major capsid protein)

JimJam_53

JimJam_54
(head-to-tail adaptor)

JimJam_55
(head-to-tail stopper)

JimJam_56

JimJam_57

JimJam_58
(major tail protein)

JimJam_59
(tail assembly chaperone)

JimJam_60
(tail assembly chaperone)

JimJam_61
(tape measure protein)

JimJam_62
(minor tail protein)

JimJam_63
(minor tail protein)

JimJam_64

JimJam_65
(minor tail protein)

JimJam_66
(minor tail protein)

JimJam_67

JimJam_68

JimJam_69

JimJam_70
(HNH endonuclease)

JimJam_71
(metallophosphoesterase)

JimJam_72
(holin)

JimJam_73
(helix-turn-helix DNA binding domain protein)

JimJam_74
(helix-turn-helix DNA binding domain protein)

JimJam_75

JimJam_76

JimJam_77

JimJam_78
(DnaB-like dsDNA helicase)

JimJam_79

JimJam_80
(DNA primase)

JimJam_81
(ssDNA binding protein)

JimJam_82
(DnaE-like DNA polymerase III alpha)

JimJam_83

JimJam_84
(MazG-like nucleotide pyrophosphohydrolase)

JimJam_85
(RecA-like DNA recombinase)

JimJam_86

JimJam_87
(holliday junction resolvase)

JimJam_88

JimJam_89

JimJam_90

JimJam_91
(Cas4 family exonuclease)

JimJam_92

JimJam_93
(RuvC-like resolvase)

JimJam_94
(DprA-like ssDNA binding protein)

JimJam_95
(helix-turn-helix DNA binding domain protein)

JimJam_96
(methyltransferase)

JimJam_97
(thymidylate kinase)

JimJam_98

JimJam_99
(helix-turn-helix DNA binding domain protein)

JimJam_100
(terminase)

JimJam_101
(HNH endonuclease)

JimJam_102

JimJam_103 — tRNA
(tRNA-Gly(tcc))

JimJam_104 — tRNA
(tRNA-Gln(ctg))

JimJam_105 — tRNA
(tRNA-Trp(cca))

JimJam_106

JimJam_107

JimJam_108 — tRNA
(tRNA-Pro(tgg))

JimJam_109
(HNH endonuclease)

JimJam_110 — tRNA
(tRNA-Pro(tgg))

JimJam_111
(nucleotidyltransferase)

JimJam_112
(FtsK-like DNA translocase)

JimJam_113

JimJam_114 — tRNA
(tRNA-Ile(tat))

JimJam_115

JimJam_116 — tRNA
(tRNA-Leu(taa))

JimJam_117

JimJam_118

JimJam_119 — tRNA
(tRNA-Ser(gga))

JimJam_120

JimJam_121 — tRNA
(tRNA-Ser(tga))

JimJam_122

JimJam_123

JimJam_124

JimJam_125

JimJam_126

JimJam_127

JimJam_128 — tRNA
(tRNA-Asp(gtc))

JimJam_129

JimJam_130

JimJam_131 — tRNA
(tRNA-Asp(gtc))

JimJam_132

JimJam_133
(Ro-like RNA binding protein)

JimJam_134

JimJam_135

JimJam_136

JimJam_137

JimJam_138
(DNA binding protein)

JimJam_139

JimJam_140

JimJam_141

JimJam_142

JimJam_143

JimJam_144 — tRNA
(tRNA-Glu(ctc))

JimJam_145

JimJam_146 — tRNA
(tRNA-Glu(ttc))

JimJam_147 — tRNA
(tRNA-Val(tac))

JimJam_148 — tRNA
(tRNA-Leu(tag))

JimJam_149
(HNH endonuclease)

JimJam_150 — tRNA
(tRNA-Leu(tag))

JimJam_151 — tRNA
(tRNA-Phe(gaa))

JimJam_152
(HNH endonuclease)

JimJam_153 — tRNA
(tRNA-Gly(gcc))

JimJam_154 — tRNA
(tRNA-Arg(tct))

JimJam_155

JimJam_156

JimJam_157

JimJam_158 — tRNA
(tRNA-Ala(tgc))

JimJam_159 — tRNA
(tRNA-Lys(ctt))

JimJam_160
(peptidase)

JimJam_161

JimJam_162 — tRNA
(tRNA-Asn(gtt))

JimJam_163

JimJam_164

JimJam_165

JimJam_166

JimJam_167 — tRNA
(tRNA-Asn(gtt))

JimJam_168
(band-7-like membrane protein)

JimJam_169

JimJam_170

JimJam_171
(HNH endonuclease)

JimJam_172

JimJam_173 — tRNA
(tRNA-Ala(ggc))

JimJam_174 — tRNA
(tRNA-Lys(ctt))

JimJam_175 — tRNA
(tRNA-Lys(ctt))

JimJam_176

JimJam_177 — tRNA
(tRNA-Lys(ttt))

JimJam_178

JimJam_179 — tRNA
(tRNA-Arg(tcg))

JimJam_180

JimJam_181 — tRNA
(tRNA-Met(cat))

JimJam_182 — tRNA
(tRNA-Met(cat))

JimJam_183

JimJam_184

JimJam_185 — tRNA
(tRNA-Tyr(gta))

JimJam_186 — tRNA
(tRNA-His(gtg))

JimJam_187

JimJam_188

JimJam_189

JimJam_190 — tRNA
(tRNA-Cys(gca))

JimJam_191 — tRNA
(tRNA-Thr(tgt))

JimJam_192 — tRNA
(tRNA-Thr(ggt))

JimJam_193

JimJam_194 — tRNA
(tRNA-Arg(acg))

JimJam_195
(HNH endonuclease)

JimJam_196

JimJam_197
(DnaQ-like exonuclease)

JimJam_198

JimJam_199 — tmRNA
(Tag peptide: ANSNVASAYALAA*)

JimJam_200

JimJam_201

JimJam_202
(acetyltransferase)

JimJam_203

JimJam_204

JimJam_205 — tRNA
(tRNA-?(Ala|Gly)(gc))

JimJam_206

JimJam_207

JimJam_208

JimJam_209

JimJam_210

JimJam_211
(RNA ligase)

JimJam_212

JimJam_213

JimJam_214

JimJam_215
(polynucleotide kinase)

JimJam_216

JimJam_217

JimJam_218

JimJam_219 — tRNA
(tRNA-Leu(gag))

JimJam_220

JimJam_221

JimJam_222 — tRNA
(tRNA-Val(gac))

JimJam_223
(SprT-like protease)

JimJam_224

JimJam_225

JimJam_226

JimJam_227 — tRNA
(tRNA-Leu(caa))

JimJam_228

JimJam_229 — tRNA
(tRNA-Ser(gct))

JimJam_230

JimJam_231

JimJam_232

JimJam_233

JimJam_234

JimJam_235

JimJam_236

JimJam_237

JimJam_238
(deoxycytidylate deaminase)

JimJam_239
(metallophosphoesterase)

JimJam_240

JimJam_241

JimJam_242
(WhiB family transcription factor)

JimJam_243

JimJam_244

JimJam_245

JimJam_246

JimJam_247

JimJam_248

JimJam_249

JimJam_250

JimJam_251

JimJam_252 — tRNA
(tRNA-Gln(ttg))

JimJam_253

JimJam_254

JimJam_255

JimJam_256

JimJam_257

JimJam_258

JimJam_259
(HNH endonuclease)

JimJam_260
(thioredoxin)

JimJam_261

JimJam_262

JimJam_263

JimJam_264

JimJam_265

JimJam_266

JimJam_267

JimJam_268
(endonuclease VII)

JimJam_269

JimJam_270

JimJam_271

JimJam_272

JimJam_273

JimJam_274

JimJam_275
(Lsr2-like DNA bridging protein)

JimJam_276

JimJam_277

JimJam_278

JimJam_279

JimJam_280

JimJam_281
(ParB-like nuclease domain protein)

JimJam_282

JimJam_283

JimJam_284

JimJam_285

JimJam_286

JimJam_287

JimJam_288

JimJam_289

JimJam_290

JimJam_291

JimJam_292

JimJam_293

JimJam_294

JimJam_295
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON970590
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.03 x 10^9
Pitt Freezer Box# 100
Pitt Freezer Box Grid# G7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload