Detailed Information for Phage Karimac |
Discovery Information |
Isolation Host | Streptomyces griseus ATCC 10137 |
Found By | Richard Hale |
Year Found | 2012 |
Location Found | Fort Worth, TX USA |
Finding Institution | University of North Texas |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 32.765556 N, 97.478611 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 17, 2014 |
Sequencing Facility | University of North Texas |
Shotgun Sequencing Method | Ion Torrent |
Approximate Shotgun Coverage | 229 |
Sanger Finishing Reactions | 5 |
Genome length (bp) | 131909 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 12590 bp |
End Determination Notes | Buildups of reads from Ion Torrent sequencing, flanking a region of double coverage. |
GC Content | 49.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BE |
Subcluster | BE2 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of North Texas |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 241 |
Number of tRNAs | 43 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH590599 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
70 |
Pitt Freezer Box Grid# |
F7 |
Available Files |
GenBank File for Phamerator | Download |