Streptomyces phage Leo04
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Detailed Information for Phage Leo04
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByKatherine Hsieh and Lara LoBello
Year Found2022
Location FoundSt. Louis, MO United States of America
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates38.64225 N, 90.29097 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 21, 2023
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage153
Genome length (bp)133191
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length11073 bp
GC Content50.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
Plaque Notesabout 1 mm in diameter
Number of Genes230
Number of tRNAs43
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Leo04_1

Leo04_2

Leo04_3

Leo04_4

Leo04_5

Leo04_6

Leo04_7
(Lsr2-like DNA bridging protein)

Leo04_8

Leo04_9
(ParB-like nuclease domain protein)

Leo04_10

Leo04_11
(ParB-like nuclease domain protein)

Leo04_12

Leo04_13

Leo04_14

Leo04_15

Leo04_16

Leo04_17

Leo04_18

Leo04_19

Leo04_20

Leo04_21

Leo04_22

Leo04_23
(HNH endonuclease)

Leo04_24

Leo04_25
(ThyX-like thymidylate synthase)

Leo04_26

Leo04_27

Leo04_28

Leo04_29

Leo04_30

Leo04_31

Leo04_32

Leo04_33

Leo04_34

Leo04_35
(nucleotidyl transferase)

Leo04_36
(glycosyltransferase)

Leo04_37
(glycosyltransferase)

Leo04_38 — tRNA
(tRNA-Thr(cgt))

Leo04_39
(HNH endonuclease)

Leo04_40
(glycosyltransferase)

Leo04_41

Leo04_42
(glycosyltransferase)

Leo04_43
(ribonucleotide reductase)

Leo04_44
(endolysin)

Leo04_45
(HNH endonuclease)

Leo04_46

Leo04_47

Leo04_48
(portal protein)

Leo04_49

Leo04_50
(capsid maturation protease)

Leo04_51
(major capsid protein)

Leo04_52

Leo04_53
(head-to-tail adaptor)

Leo04_54
(head-to-tail stopper)

Leo04_55

Leo04_56

Leo04_57
(major tail protein)

Leo04_58
(tail assembly chaperone)

Leo04_59

Leo04_60
(tape measure protein)

Leo04_61
(minor tail protein)

Leo04_62
(minor tail protein)

Leo04_63

Leo04_64
(minor tail protein)

Leo04_65
(minor tail protein)

Leo04_66

Leo04_67

Leo04_68

Leo04_69
(HNH endonuclease)

Leo04_70
(metallophosphoesterase)

Leo04_71

Leo04_72

Leo04_73
(helix-turn-helix DNA binding domain protein)

Leo04_74

Leo04_75

Leo04_76

Leo04_77
(DnaB-like dsDNA helicase)

Leo04_78

Leo04_79
(DNA primase)

Leo04_80
(SSB protein)

Leo04_81
(DnaE-like DNA polymerase III alpha)

Leo04_82

Leo04_83
(MazG-like nucleotide pyrophosphohydrolase)

Leo04_84
(RecA-like DNA recombinase)

Leo04_85

Leo04_86
(Holliday junction resolvase)

Leo04_87

Leo04_88

Leo04_89
(Cas4 exonuclease)

Leo04_90

Leo04_91
(RuvC-like resolvase)

Leo04_92
(DprA-like DNA processing chain A)

Leo04_93

Leo04_94
(thymidylate kinase)

Leo04_95

Leo04_96
(terminase small subunit)

Leo04_97
(terminase large subunit)

Leo04_98
(HNH endonuclease)

Leo04_99

Leo04_100 — tRNA
(tRNA-Gly(tcc))

Leo04_101 — tRNA
(tRNA-Gln(ctg))

Leo04_102 — tRNA
(tRNA-Trp(cca))

Leo04_103

Leo04_104 — tRNA
(tRNA-Pro(tgg))

Leo04_105 — tRNA
(tRNA-Pro(tgg))

Leo04_106
(nucleotidyl transferase)

Leo04_107
(FtsK-like DNA translocase)

Leo04_108

Leo04_109 — tRNA
(tRNA-Ile(tat))

Leo04_110

Leo04_111

Leo04_112 — tRNA
(tRNA-Ser(gga))

Leo04_113

Leo04_114 — tRNA
(tRNA-Ser(tga))

Leo04_115

Leo04_116

Leo04_117
(hydrolase)

Leo04_118

Leo04_119 — tRNA
(tRNA-Asp(gtc))

Leo04_120

Leo04_121

Leo04_122 — tRNA
(tRNA-Asp(gtc))

Leo04_123

Leo04_124

Leo04_125

Leo04_126
(Ro-like RNA binding protein)

Leo04_127

Leo04_128

Leo04_129

Leo04_130

Leo04_131

Leo04_132

Leo04_133

Leo04_134 — tRNA
(tRNA-Glu(ctc))

Leo04_135

Leo04_136 — tRNA
(tRNA-Glu(ttc))

Leo04_137 — tRNA
(tRNA-Val(tac))

Leo04_138 — tRNA
(tRNA-Leu(tag))

Leo04_139

Leo04_140 — tRNA
(tRNA-Leu(tag))

Leo04_141 — tRNA
(tRNA-Gly(gcc))

Leo04_142 — tRNA
(tRNA-Arg(tct))

Leo04_143

Leo04_144

Leo04_145

Leo04_146 — tRNA
(tRNA-Ala(tgc))

Leo04_147 — tRNA
(tRNA-Lys(ctt))

Leo04_148
(peptidase)

Leo04_149

Leo04_150 — tRNA
(tRNA-Asn(gtt))

Leo04_151

Leo04_152

Leo04_153 — tRNA
(tRNA-Asn(gtt))

Leo04_154

Leo04_155

Leo04_156

Leo04_157 — tRNA
(tRNA-Arg(cct))

Leo04_158

Leo04_159 — tRNA
(tRNA-Ile(gat))

Leo04_160 — tRNA
(tRNA-Ala(ggc))

Leo04_161 — tRNA
(tRNA-Lys(ctt))

Leo04_162 — tRNA
(tRNA-Lys(ttt))

Leo04_163 — tRNA
(tRNA-Arg(tcg))

Leo04_164

Leo04_165 — tRNA
(tRNA-Met(cat))

Leo04_166 — tRNA
(tRNA-Met(cat))

Leo04_167

Leo04_168

Leo04_169

Leo04_170 — tRNA
(tRNA-Tyr(gta))

Leo04_171 — tRNA
(tRNA-His(gtg))

Leo04_172 — tRNA
(tRNA-Phe(gaa))

Leo04_173

Leo04_174

Leo04_175 — tRNA
(tRNA-Cys(gca))

Leo04_176 — tRNA
(tRNA-Thr(tgt))

Leo04_177
(HNH endonuclease)

Leo04_178 — tRNA
(tRNA-Thr(ggt))

Leo04_179

Leo04_180 — tRNA
(tRNA-Arg(acg))

Leo04_181

Leo04_182
(DnaQ-like DNA polymerase III subunit)

Leo04_183 — tmRNA
(Tag peptide: ANSKFAFALAA*)

Leo04_184

Leo04_185
(peptidase)

Leo04_186

Leo04_187

Leo04_188
(acetyltransferase)

Leo04_189

Leo04_190 — tRNA
(tRNA-Ala(ggc))

Leo04_191

Leo04_192

Leo04_193

Leo04_194

Leo04_195
(RNA ligase)

Leo04_196

Leo04_197

Leo04_198
(polynucleotide kinase)

Leo04_199

Leo04_200

Leo04_201 — tRNA
(tRNA-Leu(gag))

Leo04_202

Leo04_203

Leo04_204 — tRNA
(tRNA-Val(gac))

Leo04_205

Leo04_206

Leo04_207 — tRNA
(tRNA-Leu(caa))

Leo04_208

Leo04_209 — tRNA
(tRNA-Ser(gct))

Leo04_210

Leo04_211

Leo04_212

Leo04_213

Leo04_214

Leo04_215

Leo04_216

Leo04_217
(deoxycytidylate deaminase)

Leo04_218
(rIIA-like protein)

Leo04_219
(rIIB-like protein)

Leo04_220
(metallophosphoesterase)

Leo04_221

Leo04_222

Leo04_223
(WhiB family transcription factor)

Leo04_224

Leo04_225

Leo04_226

Leo04_227

Leo04_228

Leo04_229

Leo04_230

Leo04_231

Leo04_232

Leo04_233 — tRNA
(tRNA-Gln(ttg))

Leo04_234

Leo04_235

Leo04_236

Leo04_237

Leo04_238

Leo04_239

Leo04_240

Leo04_241

Leo04_242
(thioredoxin)

Leo04_243

Leo04_244

Leo04_245

Leo04_246

Leo04_247

Leo04_248

Leo04_249

Leo04_250

Leo04_251

Leo04_252

Leo04_253

Leo04_254

Leo04_255

Leo04_256

Leo04_257

Leo04_258
(Lsr2-like DNA bridging protein)

Leo04_259

Leo04_260
(ParB-like nuclease domain protein)

Leo04_261

Leo04_262
(ParB-like nuclease domain protein)

Leo04_263

Leo04_264

Leo04_265

Leo04_266

Leo04_267

Leo04_268

Leo04_269

Leo04_270

Leo04_271

Leo04_272

Leo04_273

Leo04_274
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP537959
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 2.63*10^9
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload