| Detailed Information for Phage Lyell |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Former names | Wallus |
| Found By | Kayla Doucette |
| Year Found | 2017 |
| Location Found | River Falls, WI USA |
| Finding Institution | University of Wisconsin-River Falls |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 44.85 N, 92.63 W Map |
| Discovery Notes | Collected: 9-10-17
Location of collection: Glen Park, around 4 feet off the river bank of the Kinnickinnic River
Soil Condition: damp, very loose, a mixture of soil and sand granules
Soil Depth of collection: 130mm
Air temperature of location: 69 degrees Fahrenheit
|
| Naming Notes | The first couple round of plaques showed that wallus had large, thicker plaque formations. So I thought of a Wallrus, and decided the name should be, Wallus. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 10, 2018 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 3168 |
| Genome length (bp) | 62716 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 3549 bp |
| GC Content | 61.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | ED |
| Subcluster | ED2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | University of Wisconsin-River Falls |
| Annotation Status | In GenBank |
| Plaque Notes | Size - varies from 1mm-4mm
Appearance- clear circles (kind of odd shaped), not perfect circles and very light halos around clear plaque formations
|
| Morphotype | Siphoviridae |
| Number of Genes | 122 |
| Number of tRNAs | 3 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH371109 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
69 |
| Pitt Freezer Box Grid# |
G7 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
