Discovery Information |
Isolation Host | Streptomyces mirabilis NRRL B-2400 |
Found By | Jenell Lewis and Hira Ahmed |
Year Found | 2019 |
Location Found | Poolesville, MD United States |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 39.129923 N, 77.411686 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Apr 20, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 590 |
Genome length (bp) | 130258 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 12198 bp |
GC Content | 49.5% |
Sequencing Notes | When this phage was sequenced, there was also a smaller "phagelet" in the sample at much higher read depth than this phage. The phagelet was named MiniFlayer. MindFlayer was subsequently separated from MiniFlayer in the lab. |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BE |
Subcluster | BE2 |
Cluster Life Cycle | Lytic |
Lysogeny Notes | Most likely virulent. |
Other Cluster Members |
|
Annotating Institution | University of Maryland, Baltimore County |
Annotation Status | In GenBank |
Plaque Notes | Clear plaques, varying sizes of 1mm to 5mm, and small plaques are round while larger plaques are irregular in shape. |
Morphotype | Siphoviridae |
Number of Genes | 234 |
Number of tRNAs | 42 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MW291014 |
Refseq Number | None yet |
Published in Paper | deCarvalho et al, 2023 2023, The ISME Journal: Simultaneous entry as an adaptation to virulence in a novel satellite-helper system infecting Streptomyces species |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
8.1e8 |
Pitt Freezer Box# |
117 |
Pitt Freezer Box Grid# |
A8 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |