Streptomyces phage MindFlayer
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Detailed Information for Phage MindFlayer
Discovery Information
Isolation HostStreptomyces mirabilis NRRL B-2400
Found ByJenell Lewis and Hira Ahmed
Year Found2019
Location FoundPoolesville, MD United States
Finding InstitutionUniversity of Maryland, Baltimore County
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates39.129923 N, 77.411686 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 20, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage590
Genome length (bp)130258
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length12198 bp
GC Content49.5%
Sequencing NotesWhen this phage was sequenced, there was also a smaller "phagelet" in the sample at much higher read depth than this phage. The phagelet was named MiniFlayer. MindFlayer was subsequently separated from MiniFlayer in the lab.
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE2
Cluster Life CycleLytic
Lysogeny NotesMost likely virulent.
Other Cluster Members
Annotating InstitutionUniversity of Maryland, Baltimore County
Annotation StatusIn GenBank
Plaque NotesClear plaques, varying sizes of 1mm to 5mm, and small plaques are round while larger plaques are irregular in shape.
MorphotypeSiphoviridae
Number of Genes234
Number of tRNAs42
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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MindFlayer_1

MindFlayer_2

MindFlayer_3

MindFlayer_4

MindFlayer_5

MindFlayer_6
(Lsr2-like DNA bridging protein)

MindFlayer_7

MindFlayer_8

MindFlayer_9

MindFlayer_10

MindFlayer_11

MindFlayer_12
(ParB-like nuclease domain protein)

MindFlayer_13

MindFlayer_14

MindFlayer_15

MindFlayer_16

MindFlayer_17

MindFlayer_18

MindFlayer_19

MindFlayer_20

MindFlayer_21

MindFlayer_22

MindFlayer_23

MindFlayer_24

MindFlayer_25
(HNH endonuclease)

MindFlayer_26

MindFlayer_27

MindFlayer_28
(ThyX-like thymidylate synthase)

MindFlayer_29

MindFlayer_30

MindFlayer_31

MindFlayer_32

MindFlayer_33

MindFlayer_34

MindFlayer_35

MindFlayer_36

MindFlayer_37 — tRNA
(tRNA-Thr(cgt))

MindFlayer_38
(HNH endonuclease)

MindFlayer_39
(hydrolase)

MindFlayer_40

MindFlayer_41

MindFlayer_42
(glycosyltransferase)

MindFlayer_43
(ribonucleotide reductase)

MindFlayer_44
(endolysin)

MindFlayer_45

MindFlayer_46

MindFlayer_47
(portal protein)

MindFlayer_48

MindFlayer_49
(capsid maturation protease)

MindFlayer_50
(major capsid protein)

MindFlayer_51

MindFlayer_52
(head-to-tail adaptor)

MindFlayer_53
(head-to-tail stopper)

MindFlayer_54

MindFlayer_55

MindFlayer_56
(major tail protein)

MindFlayer_57
(tail assembly chaperone)

MindFlayer_58

MindFlayer_59
(tape measure protein)

MindFlayer_60

MindFlayer_61
(minor tail protein)

MindFlayer_62

MindFlayer_63
(minor tail protein)

MindFlayer_64
(minor tail protein)

MindFlayer_65

MindFlayer_66

MindFlayer_67

MindFlayer_68
(HNH endonuclease)

MindFlayer_69
(metallophosphoesterase)

MindFlayer_70
(holin)

MindFlayer_71
(helix-turn-helix DNA-binding domain protein)

MindFlayer_72
(MerR-like helix-turn-helix DNA binding domain protein)

MindFlayer_73

MindFlayer_74

MindFlayer_75

MindFlayer_76
(DnaB-like dsDNA helicase)

MindFlayer_77
(DNA primase)

MindFlayer_78
(ssDNA binding protein)

MindFlayer_79
(DnaE-like DNA polymerase III alpha)

MindFlayer_80

MindFlayer_81
(MazG-like nucleotide pyrophosphohydrolase)

MindFlayer_82
(RecA-like DNA recombinase)

MindFlayer_83

MindFlayer_84
(Holliday junction resolvase)

MindFlayer_85

MindFlayer_86

MindFlayer_87

MindFlayer_88
(Cas4 family exonuclease)

MindFlayer_89

MindFlayer_90
(RuvC-like resolvase)

MindFlayer_91
(DprA-like ssDNA binding protein)

MindFlayer_92
(MerR-like helix-turn-helix DNA binding domain protein)

MindFlayer_93
(methyltransferase)

MindFlayer_94
(thymidylate kinase)

MindFlayer_95

MindFlayer_96
(helix-turn-helix DNA-binding domain protein)

MindFlayer_97
(terminase)

MindFlayer_98
(HNH endonuclease)

MindFlayer_99

MindFlayer_100 — tRNA
(tRNA-Gly(tcc))

MindFlayer_101 — tRNA
(tRNA-Gln(ctg))

MindFlayer_102 — tRNA
(tRNA-Trp(cca))

MindFlayer_103

MindFlayer_104

MindFlayer_105 — tRNA
(tRNA-Pro(tgg))

MindFlayer_106 — tRNA
(tRNA-Pro(tgg))

MindFlayer_107
(tRNA nucleotidyltransferase)

MindFlayer_108
(FtsK-like DNA translocase)

MindFlayer_109

MindFlayer_110 — tRNA
(tRNA-Ile(tat))

MindFlayer_111

MindFlayer_112 — tRNA
(tRNA-Leu(taa))

MindFlayer_113

MindFlayer_114

MindFlayer_115 — tRNA
(tRNA-Ser(gga))

MindFlayer_116

MindFlayer_117

MindFlayer_118
(AAA-ATPase)

MindFlayer_119

MindFlayer_120

MindFlayer_121

MindFlayer_122 — tRNA
(tRNA-Asp(gtc))

MindFlayer_123

MindFlayer_124

MindFlayer_125 — tRNA
(tRNA-Asp(gtc))

MindFlayer_126

MindFlayer_127
(Ro-like RNA binding protein)

MindFlayer_128

MindFlayer_129

MindFlayer_130

MindFlayer_131
(DNA binding protein)

MindFlayer_132

MindFlayer_133

MindFlayer_134

MindFlayer_135

MindFlayer_136

MindFlayer_137 — tRNA
(tRNA-Glu(ctc))

MindFlayer_138

MindFlayer_139 — tRNA
(tRNA-Glu(ttc))

MindFlayer_140 — tRNA
(tRNA-Val(tac))

MindFlayer_141 — tRNA
(tRNA-Leu(tag))

MindFlayer_142 — tRNA
(tRNA-Leu(tag))

MindFlayer_143 — tRNA
(tRNA-Phe(gaa))

MindFlayer_144 — tRNA
(tRNA-Gly(gcc))

MindFlayer_145 — tRNA
(tRNA-Arg(tct))

MindFlayer_146

MindFlayer_147

MindFlayer_148

MindFlayer_149 — tRNA
(tRNA-Ala(tgc))

MindFlayer_150 — tRNA
(tRNA-Lys(ctt))

MindFlayer_151
(peptidase)

MindFlayer_152

MindFlayer_153 — tRNA
(tRNA-Asn(gtt))

MindFlayer_154

MindFlayer_155

MindFlayer_156 — tRNA
(tRNA-Asn(gtt))

MindFlayer_157
(band-7-like membrane protein)

MindFlayer_158

MindFlayer_159

MindFlayer_160 — tRNA
(tRNA-Arg(cct))

MindFlayer_161

MindFlayer_162 — tRNA
(tRNA-Ala(ggc))

MindFlayer_163 — tRNA
(tRNA-Lys(ctt))

MindFlayer_164 — tRNA
(tRNA-Lys(ctt))

MindFlayer_165

MindFlayer_166 — tRNA
(tRNA-Lys(ttt))

MindFlayer_167

MindFlayer_168 — tRNA
(tRNA-Arg(tcg))

MindFlayer_169

MindFlayer_170 — tRNA
(tRNA-Met(cat))

MindFlayer_171 — tRNA
(tRNA-Met(cat))

MindFlayer_172

MindFlayer_173

MindFlayer_174 — tRNA
(tRNA-Tyr(gta))

MindFlayer_175

MindFlayer_176

MindFlayer_177

MindFlayer_178 — tRNA
(tRNA-Cys(gca))

MindFlayer_179 — tRNA
(tRNA-Thr(tgt))

MindFlayer_180 — tRNA
(tRNA-Thr(ggt))

MindFlayer_181

MindFlayer_182 — tRNA
(tRNA-Arg(acg))

MindFlayer_183
(DnaQ-like DNA polymerase III subunit)

MindFlayer_184

MindFlayer_185 — tmRNA
(Tag peptide: ANSNVASAYALAA*)

MindFlayer_186

MindFlayer_187

MindFlayer_188
(acetyltransferase)

MindFlayer_189

MindFlayer_190

MindFlayer_191 — tRNA
(tRNA-?(Ala|Gly)(gc))

MindFlayer_192

MindFlayer_193

MindFlayer_194

MindFlayer_195

MindFlayer_196

MindFlayer_197
(RNA ligase)

MindFlayer_198

MindFlayer_199

MindFlayer_200

MindFlayer_201
(polynucleotide kinase)

MindFlayer_202

MindFlayer_203

MindFlayer_204

MindFlayer_205 — tRNA
(tRNA-Leu(gag))

MindFlayer_206

MindFlayer_207

MindFlayer_208 — tRNA
(tRNA-Val(gac))

MindFlayer_209
(SprT-like protease)

MindFlayer_210

MindFlayer_211

MindFlayer_212

MindFlayer_213 — tRNA
(tRNA-Leu(caa))

MindFlayer_214

MindFlayer_215 — tRNA
(tRNA-Ser(gct))

MindFlayer_216

MindFlayer_217

MindFlayer_218

MindFlayer_219

MindFlayer_220

MindFlayer_221

MindFlayer_222

MindFlayer_223

MindFlayer_224
(deoxycytidylate deaminase)

MindFlayer_225
(metallophosphoesterase)

MindFlayer_226

MindFlayer_227

MindFlayer_228
(WhiB family transcription factor)

MindFlayer_229

MindFlayer_230

MindFlayer_231

MindFlayer_232

MindFlayer_233

MindFlayer_234

MindFlayer_235

MindFlayer_236

MindFlayer_237

MindFlayer_238 — tRNA
(tRNA-Gln(ttg))

MindFlayer_239

MindFlayer_240

MindFlayer_241

MindFlayer_242

MindFlayer_243

MindFlayer_244

MindFlayer_245
(thioredoxin)

MindFlayer_246

MindFlayer_247

MindFlayer_248

MindFlayer_249

MindFlayer_250

MindFlayer_251

MindFlayer_252

MindFlayer_253

MindFlayer_254

MindFlayer_255

MindFlayer_256

MindFlayer_257

MindFlayer_258
(Lsr2-like DNA bridging protein)

MindFlayer_259

MindFlayer_260

MindFlayer_261

MindFlayer_262

MindFlayer_263

MindFlayer_264
(ParB-like nuclease domain protein)

MindFlayer_265

MindFlayer_266

MindFlayer_267

MindFlayer_268

MindFlayer_269

MindFlayer_270

MindFlayer_271

MindFlayer_272

MindFlayer_273

MindFlayer_274

MindFlayer_275

MindFlayer_276

MindFlayer_277
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW291014
Refseq NumberNone yet
Published in PaperdeCarvalho et al, 2023 2023, The ISME Journal: Simultaneous entry as an adaptation to virulence in a novel satellite-helper system infecting Streptomyces species
Archiving Info
Archiving status Archived
SEA Lysate Titer 8.1e8
Pitt Freezer Box# 117
Pitt Freezer Box Grid# A8
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload