Streptomyces phage Mugiwara
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Detailed Information for Phage Mugiwara
Discovery Information
Isolation HostStreptomyces avermitilis NRRL 8165
Found ByGil Toex
Year Found2023
Location FoundNoertrange, Luxembourg
Finding InstitutionUniversity of Ottawa
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature26°C
GPS Coordinates49.98127 N, 5.903158 E Map
Discovery NotesFound in a grassy area near fir trees (3-5 cm below the surface).
Genomic DNA was sequenced on a ONT Minion, R10.4.1 chemistry. The sequence assembled into 5 contigs. Two contigs (3,047bp and 2,300pb) with an average of 81.33% query cover, 89.84% indentity to phiScoe45 which is 88.68% identical to Saftant (BD3). Two contigs (2,785bp and 2,589bp) with an average of 95.66% query cover, 89.24% indentity to LukeCage (BE2). One contig (2,564bp) with 65% query cover, 92.04% indentity to Endor2 which is 93.68% indentical to Celery (BD3).
Naming NotesThe name "Mugiwara" comes from a Japanese anime called "One Piece" and means "straw hat".
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 6, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina MiSeq
Read TypeSingle-end reads
Read Length150 bp
Approximate Shotgun Coverage391
Genome length (bp)133330
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length11945 bp
GC Content49.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE2
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Lagos
Annotation StatusIn GenBank
Plaque NotesSmall and clear plaques
MorphotypeSiphoviridae
Number of Genes247
Number of tRNAs44
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Mugiwara_1

Mugiwara_2

Mugiwara_3

Mugiwara_4

Mugiwara_5

Mugiwara_6
(Lsr2-like DNA bridging protein)

Mugiwara_7

Mugiwara_8

Mugiwara_9

Mugiwara_10

Mugiwara_11
(ParB N-terminal-like domain)

Mugiwara_12

Mugiwara_13

Mugiwara_14

Mugiwara_15

Mugiwara_16

Mugiwara_17

Mugiwara_18

Mugiwara_19

Mugiwara_20

Mugiwara_21

Mugiwara_22

Mugiwara_23

Mugiwara_24

Mugiwara_25
(HNH Endonuclease)

Mugiwara_26

Mugiwara_27

Mugiwara_28

Mugiwara_29
(ThyX-like thymidylate synthase)

Mugiwara_30

Mugiwara_31

Mugiwara_32

Mugiwara_33

Mugiwara_34

Mugiwara_35

Mugiwara_36

Mugiwara_37

Mugiwara_38 — tRNA
(tRNA-Thr(cgt))

Mugiwara_39
(HNH endonuclease)

Mugiwara_40
(transglycosylase)

Mugiwara_41

Mugiwara_42

Mugiwara_43
(Glycosyltransferase)

Mugiwara_44
(Ribonucleotide Reductase)

Mugiwara_45
(Endolysin)

Mugiwara_46

Mugiwara_47

Mugiwara_48
(Portal Protein)

Mugiwara_49

Mugiwara_50
(Capsid maturation protease)

Mugiwara_51
(Major capsid protein)

Mugiwara_52

Mugiwara_53
(Head-to-tail adaptor)

Mugiwara_54

Mugiwara_55

Mugiwara_56

Mugiwara_57
(Major Tail Protein)

Mugiwara_58
(Tail Assembly Chaperone)

Mugiwara_59

Mugiwara_60
(tape measure protein)

Mugiwara_61
(tail protein)

Mugiwara_62
(minor tail protein)

Mugiwara_63

Mugiwara_64
(minor tail protein)

Mugiwara_65
(minor tail protein)

Mugiwara_66

Mugiwara_67

Mugiwara_68

Mugiwara_69
(HNH endonuclease)

Mugiwara_70
(Metallophosphatase)

Mugiwara_71
(Holin)

Mugiwara_72
(Helix-turn-Helix DNA Binding Protein)

Mugiwara_73

Mugiwara_74

Mugiwara_75

Mugiwara_76

Mugiwara_77
(DnaB-Like dsDNA Helicase)

Mugiwara_78

Mugiwara_79
(DNA Primase)

Mugiwara_80
(SSB)

Mugiwara_81
(DnaE-like DNA polymerase III alpha)

Mugiwara_82

Mugiwara_83
(MazG-Like Nucleotide Pyrophosphohydrolase)

Mugiwara_84
(RecA-like DNA recombinase)

Mugiwara_85

Mugiwara_86
(holiday junction resolvase)

Mugiwara_87

Mugiwara_88

Mugiwara_89

Mugiwara_90
(Cas4 family exonuclease)

Mugiwara_91

Mugiwara_92
(RuvC-like resolvase)

Mugiwara_93
(DprA-like ssDNA binding protein)

Mugiwara_94
(helix-turn-helix DNA-binding domain protein)

Mugiwara_95
(Methyltransferase)

Mugiwara_96
(Thymidylate Kinase)

Mugiwara_97

Mugiwara_98

Mugiwara_99
(Terminase)

Mugiwara_100
(HNH Endonuclease)

Mugiwara_101

Mugiwara_102 — tRNA
(tRNA-Gly(tcc))

Mugiwara_103 — tRNA
(tRNA-Gln(ctg))

Mugiwara_104 — tRNA
(tRNA-Trp(cca))

Mugiwara_105

Mugiwara_106

Mugiwara_107 — tRNA
(tRNA-Pro(tgg))

Mugiwara_108 — tRNA
(tRNA-Pro(tgg))

Mugiwara_109
(Nucleotidyltransferase)

Mugiwara_110
(FtsK-like DNA translocase)

Mugiwara_111

Mugiwara_112 — tRNA
(tRNA-Ile(tat))

Mugiwara_113

Mugiwara_114 — tRNA
(tRNA-Leu(taa))

Mugiwara_115

Mugiwara_116

Mugiwara_117 — tRNA
(tRNA-Ser(gga))

Mugiwara_118

Mugiwara_119 — tRNA
(tRNA-Ser(tga))

Mugiwara_120

Mugiwara_121

Mugiwara_122

Mugiwara_123

Mugiwara_124

Mugiwara_125 — tRNA
(tRNA-Asp(gtc))

Mugiwara_126

Mugiwara_127

Mugiwara_128

Mugiwara_129 — tRNA
(tRNA-Asp(gtc))

Mugiwara_130

Mugiwara_131
(Ro-like RNA binding protein)

Mugiwara_132

Mugiwara_133

Mugiwara_134

Mugiwara_135

Mugiwara_136

Mugiwara_137

Mugiwara_138

Mugiwara_139

Mugiwara_140

Mugiwara_141

Mugiwara_142 — tRNA
(tRNA-Glu(ctc))

Mugiwara_143

Mugiwara_144

Mugiwara_145 — tRNA
(tRNA-Glu(ttc))

Mugiwara_146 — tRNA
(tRNA-Val(tac))

Mugiwara_147 — tRNA
(tRNA-Leu(tag))

Mugiwara_148 — tRNA
(tRNA-Leu(tag))

Mugiwara_149 — tRNA
(tRNA-Phe(gaa))

Mugiwara_150 — tRNA
(tRNA-?(Thr/Tyr) (gt))

Mugiwara_151 — tRNA
(tRNA-Gly(gcc))

Mugiwara_152 — tRNA
(tRNA-Arg(tct))

Mugiwara_153

Mugiwara_154

Mugiwara_155

Mugiwara_156 — tRNA
(tRNA-Ala(tgc))

Mugiwara_157 — tRNA
(tRNA-Lys(ctt))

Mugiwara_158
(Peptidase)

Mugiwara_159

Mugiwara_160 — tRNA
(tRNA-Asn(gtt))

Mugiwara_161

Mugiwara_162 — tRNA
(tRNA-Asn(gtt))

Mugiwara_163
(Band-7-like membrane protein)

Mugiwara_164

Mugiwara_165

Mugiwara_166 — tRNA
(tRNA-Arg(cct))

Mugiwara_167

Mugiwara_168 — tRNA
(tRNA-Ala(ggc))

Mugiwara_169 — tRNA
(tRNA-Lys(ctt))

Mugiwara_170 — tRNA
(tRNA-Lys(ctt))

Mugiwara_171

Mugiwara_172 — tRNA
(tRNA-Lys(ttt))

Mugiwara_173
(HNH Endonuclease)

Mugiwara_174

Mugiwara_175 — tRNA
(tRNA-Arg(tcg))

Mugiwara_176

Mugiwara_177 — tRNA
(tRNA-Met(cat))

Mugiwara_178 — tRNA
(tRNA-Met(cat))

Mugiwara_179

Mugiwara_180

Mugiwara_181 — tRNA
(tRNA-His(gtg))

Mugiwara_182

Mugiwara_183

Mugiwara_184

Mugiwara_185 — tRNA
(tRNA-Cys(gca))

Mugiwara_186 — tRNA
(tRNA-Thr(tgt))

Mugiwara_187 — tRNA
(tRNA-Thr(ggt))

Mugiwara_188

Mugiwara_189 — tRNA
(tRNA-Arg(acg))

Mugiwara_190
(HNH Endonuclease)

Mugiwara_191
(DnaQ-like DNA polymerase III subunit)

Mugiwara_192

Mugiwara_193

Mugiwara_194 — tmRNA
(Tag peptide: ANSNVASAYALAA*)

Mugiwara_195

Mugiwara_196

Mugiwara_197

Mugiwara_198

Mugiwara_199

Mugiwara_200

Mugiwara_201 — tRNA
(tRNA-? (Ala/Gly) (gc))

Mugiwara_202

Mugiwara_203
(histidine triad nucleotide binding protein)

Mugiwara_204

Mugiwara_205

Mugiwara_206

Mugiwara_207

Mugiwara_208

Mugiwara_209
(RNA ligase)

Mugiwara_210

Mugiwara_211

Mugiwara_212

Mugiwara_213
(Polynucleotide kinase)

Mugiwara_214

Mugiwara_215

Mugiwara_216

Mugiwara_217

Mugiwara_218

Mugiwara_219

Mugiwara_220 — tRNA
(tRNA-Leu(gag))

Mugiwara_221

Mugiwara_222

Mugiwara_223 — tRNA
(tRNA-Val(gac))

Mugiwara_224
(SprT-like protease)

Mugiwara_225

Mugiwara_226

Mugiwara_227 — tRNA
(tRNA-Leu(caa))

Mugiwara_228

Mugiwara_229 — tRNA
(tRNA-Ser(gct))

Mugiwara_230

Mugiwara_231

Mugiwara_232

Mugiwara_233

Mugiwara_234

Mugiwara_235

Mugiwara_236

Mugiwara_237

Mugiwara_238
(Deoxycytidylate deaminase)

Mugiwara_239
(Metallophosphatase)

Mugiwara_240

Mugiwara_241

Mugiwara_242
(WhiB family transcription factor)

Mugiwara_243

Mugiwara_244

Mugiwara_245

Mugiwara_246

Mugiwara_247

Mugiwara_248

Mugiwara_249

Mugiwara_250

Mugiwara_251

Mugiwara_252

Mugiwara_253 — tRNA
(tRNA-Gln(ttg))

Mugiwara_254

Mugiwara_255

Mugiwara_256

Mugiwara_257

Mugiwara_258

Mugiwara_259

Mugiwara_260
(Thioredoxin)

Mugiwara_261

Mugiwara_262

Mugiwara_263

Mugiwara_264

Mugiwara_265

Mugiwara_266

Mugiwara_267

Mugiwara_268

Mugiwara_269

Mugiwara_270

Mugiwara_271

Mugiwara_272

Mugiwara_273
(Lsr2-like DNA bridging protein)

Mugiwara_274

Mugiwara_275

Mugiwara_276

Mugiwara_277

Mugiwara_278
(ParB N-terminal-like domain)

Mugiwara_279

Mugiwara_280

Mugiwara_281

Mugiwara_282

Mugiwara_283

Mugiwara_284

Mugiwara_285

Mugiwara_286

Mugiwara_287

Mugiwara_288

Mugiwara_289

Mugiwara_290

Mugiwara_291

Mugiwara_292
(HNH Endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPV876970
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.4 X 10^9
Pitt Freezer Box# 176
Pitt Freezer Box Grid# E12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload