Streptomyces phage Navo
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Detailed Information for Phage Navo
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByNora Navid and Emily Oh
Year Found2021
Location FoundSt. Louis, MO United States of America
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates38.643608 N, 90.298273 W Map
Discovery NotesSoil was wet from rain and collected near a pond, 3 cm below the surface.
Naming NotesNavo is a combination of our last names, Navid and Oh.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedApr 24, 2024
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage156
Genome length (bp)130203
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10578 bp
GC Content50.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusQC Complete
Plaque NotesSmall, clear, round plaques with well defined edges.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Navo_1

Navo_2

Navo_3

Navo_4

Navo_5

Navo_6
(Lsr2-like DNA bridging protein)

Navo_7

Navo_8

Navo_9
(ParB-like nuclease domain)

Navo_10

Navo_11

Navo_12

Navo_13

Navo_14

Navo_15

Navo_16

Navo_17

Navo_18

Navo_19

Navo_20

Navo_21
(HNH endonuclease)

Navo_22

Navo_23
(ThyX-like thymidylate synthase)

Navo_24
(LAGLIDADG endonuclease)

Navo_25

Navo_26
(MutT-like nucleotide pyrophosphohydrolase)

Navo_27

Navo_28

Navo_29

Navo_30

Navo_31

Navo_32

Navo_33

Navo_35
(HNH endonuclease)

Navo_36
(glycosyltransferase)

Navo_37

Navo_38

Navo_39
(glycosyltransferase)

Navo_40
(ribonucleotide reductase)

Navo_41
(endolysin)

Navo_42
(HNH endonuclease)

Navo_43

Navo_44

Navo_45
(portal protein)

Navo_46

Navo_47
(capsid maturation protease)

Navo_48
(major capsid protein)

Navo_49

Navo_50
(head-to-tail adaptor)

Navo_51
(head-to-tail stopper)

Navo_52

Navo_53
(tail terminator)

Navo_54
(major tail protein)

Navo_55
(tail assembly chaperone)

Navo_56

Navo_57
(tape measure protein)

Navo_58
(minor tail protein)

Navo_59
(minor tail protein)

Navo_60

Navo_61
(minor tail protein)

Navo_62
(minor tail protein)

Navo_63

Navo_64

Navo_65

Navo_66
(HNH endonuclease)

Navo_67
(metallophosphoesterase)

Navo_68

Navo_69

Navo_70

Navo_71

Navo_72

Navo_73

Navo_74
(DnaB-like dsDNA helicase)

Navo_75
(DNA primase)

Navo_76
(SSB protein)

Navo_77
(DnaE-like DNA polymerase III (alpha))

Navo_78

Navo_79
(MazG-like nucleotide pyrophosphohydrolase)

Navo_80
(RecA-like DNA recombinase)

Navo_81

Navo_82
(Holliday junction resolvase)

Navo_83

Navo_84

Navo_85
(Cas4 exonuclease)

Navo_86

Navo_87
(RuvC-like resolvase)

Navo_88
(DprA-like ssDNA binding protein)

Navo_89
(helix-turn-helix DNA binding domain)

Navo_90
(methyltransferase)

Navo_91
(thymidylate kinase)

Navo_92

Navo_93
(terminase, small subunit)

Navo_94
(terminase, large subunit)

Navo_95
(HNH endonuclease)

Navo_96

Navo_100

Navo_101

Navo_104
(nucleotidyl transferase)

Navo_105
(FtsK-like DNA translocase)

Navo_106

Navo_108

Navo_109

Navo_111

Navo_113

Navo_114

Navo_115

Navo_117

Navo_118

Navo_120

Navo_121

Navo_122
(Ro-like RNA binding protein)

Navo_123

Navo_124

Navo_125

Navo_126

Navo_127

Navo_128

Navo_129

Navo_131

Navo_133

Navo_136

Navo_140

Navo_141

Navo_142

Navo_145
(peptidase)

Navo_146

Navo_148

Navo_149

Navo_151

Navo_152

Navo_157
(HNH endonuclease)

Navo_159
(HNH endonuclease)

Navo_160

Navo_161

Navo_164

Navo_165

Navo_166

Navo_170

Navo_171

Navo_175

Navo_176

Navo_177
(DnaQ-like (DNA polymerase III subunit))

Navo_179
(hydrolase)

Navo_180

Navo_181

Navo_182
(acetyltransferase)

Navo_183

Navo_184

Navo_185

Navo_186

Navo_187
(RNA ligase)

Navo_188

Navo_189

Navo_190

Navo_191
(polynucleotide kinase)

Navo_192

Navo_193

Navo_195

Navo_196

Navo_198

Navo_199

Navo_201

Navo_202
(Holliday junction resolvase)

Navo_204

Navo_205

Navo_206

Navo_207

Navo_208

Navo_209

Navo_210

Navo_211
(deoxycytidylate deaminase)

Navo_212
(rIIA-like protein)

Navo_213
(rIIB-like protein)

Navo_214
(phosphoesterase)

Navo_215

Navo_216

Navo_217
(WhiB family transcription factor)

Navo_218

Navo_219

Navo_220

Navo_221

Navo_222

Navo_223

Navo_224

Navo_225

Navo_227

Navo_228

Navo_229

Navo_230

Navo_231

Navo_232

Navo_233
(thioredoxin)

Navo_234

Navo_235

Navo_236

Navo_237

Navo_238

Navo_239

Navo_240

Navo_241

Navo_242

Navo_243

Navo_244

Navo_245

Navo_246

Navo_247

Navo_248
(Lsr2-like DNA bridging protein)

Navo_249

Navo_250

Navo_251
(ParB-like nuclease domain)

Navo_252

Navo_253

Navo_254

Navo_255

Navo_256

Navo_257

Navo_258

Navo_259

Navo_260

Navo_261

Navo_262

Navo_263
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
SEA Lysate Titer 1.34x10^10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload