Detailed Information for Phage OlinDD |
Discovery Information |
Isolation Host | Microbacterium paraoxydans NWU1 |
Found By | Dayton D. Dolincheck |
Year Found | 2016 |
Location Found | Lincoln, NE USA |
Finding Institution | Nebraska Wesleyan University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.84 N, 96.65027 W Map |
Discovery Notes | Soil was a little moist and clumpy |
Naming Notes | I found it outside of Nebraska Wesleyan University's Science building by the name of Olin. I also used my initials. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1791 |
Genome length (bp) | 63123 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 3158 bp |
GC Content | 64.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | ED |
Subcluster | ED1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Nebraska Wesleyan University |
Annotation Status | In GenBank |
Plaque Notes | The plaques were very round, clear, and consistent. |
Morphotype | Siphoviridae |
Number of Genes | 114 |
Number of tRNAs | 4 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH271307 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
45 |
Pitt Freezer Box Grid# |
F6 |
Available Files |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |