Arthrobacter phage OtsoOtso
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Detailed Information for Phage OtsoOtso
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByJason Hungreder
Year Found2024
Location FoundStorrs, CT America
Finding InstitutionUniversity of Connecticut
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature22°C
GPS Coordinates42.0 N, 72.0 W Map
Discovery NotesIt was very fun and I dug probably 4 inches deep down. It was around one in the morning.
Naming NotesI named it after one of the most famous Filipino songs: "Otso Otso"
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 27, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage3121
Genome length (bp)38077
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTTGCCGGCA
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS2
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Connecticut
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes71
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

OtsoOtso_1

OtsoOtso_2

OtsoOtso_3
(terminase, large subunit)

OtsoOtso_4
(RNA binding protein)

OtsoOtso_5
(portal protein)

OtsoOtso_6
(capsid maturation protease)

OtsoOtso_7
(major capsid protein)

OtsoOtso_8

OtsoOtso_9
(head-to-tail adaptor)

OtsoOtso_10
(head-to-tail stopper)

OtsoOtso_11

OtsoOtso_12
(tail terminator)

OtsoOtso_13
(major tail protein)

OtsoOtso_14
(tail assembly chaperone)

OtsoOtso_15
(tail assembly chaperone)

OtsoOtso_16
(tape measure protein)

OtsoOtso_17
(minor tail protein)

OtsoOtso_18
(baseplate hub)

OtsoOtso_19
(minor tail protein)

OtsoOtso_20
(minor tail protein)

OtsoOtso_21

OtsoOtso_22

OtsoOtso_23
(endolysin)

OtsoOtso_24
(holin)

OtsoOtso_25

OtsoOtso_26
(helix-turn-helix DNA binding domain)

OtsoOtso_27

OtsoOtso_28

OtsoOtso_29

OtsoOtso_31

OtsoOtso_32
(HNH endonuclease)

OtsoOtso_33
(helix-turn-helix DNA binding domain)

OtsoOtso_34

OtsoOtso_35

OtsoOtso_36

OtsoOtso_37
(tyrosine integrase)

OtsoOtso_38
(immunity repressor)

OtsoOtso_39
(helix-turn-helix DNA binding domain)

OtsoOtso_40
(helix-turn-helix DNA binding domain)

OtsoOtso_41
(RecE-like exonuclease)

OtsoOtso_42
(RecT-like DNA pairing protein)

OtsoOtso_43
(helix-turn-helix DNA binding domain)

OtsoOtso_44
(RusA-like resolvase)

OtsoOtso_45
(helix-turn-helix DNA binding domain)

OtsoOtso_46
(DNA methyltransferase)

OtsoOtso_47
(DNA methyltransferase)

OtsoOtso_48

OtsoOtso_49

OtsoOtso_50

OtsoOtso_51

OtsoOtso_52

OtsoOtso_53

OtsoOtso_54
(nucleoside deoxyribosyltransferase)

OtsoOtso_55

OtsoOtso_56
(NucT-like nuclease)

OtsoOtso_57
(terminase, small subunit)

OtsoOtso_58

OtsoOtso_59

OtsoOtso_60

OtsoOtso_61

OtsoOtso_62

OtsoOtso_63

OtsoOtso_64

OtsoOtso_65

OtsoOtso_66

OtsoOtso_67

OtsoOtso_68

OtsoOtso_69

OtsoOtso_70

OtsoOtso_71
(helix-turn-helix DNA binding domain)

OtsoOtso_72
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX071749
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 200
Pitt Freezer Box Grid# C11
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload