Streptomyces phage Persimmon
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Detailed Information for Phage Persimmon
Discovery Information
Isolation HostStreptomyces lividans JI 1326
Found ByWanji Li & Mary Shang
Year Found2021
Location FoundSt. Louis, MO United States America
Finding InstitutionWashington University in St. Louis
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature29°C
GPS Coordinates38.643333 N, 90.291389 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedOct 18, 2022
Sequencing FacilityThe McDonnell Genome Institute at Washington University
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage154
Genome length (bp)131421
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10610 bp
GC Content50.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionWashington University in St. Louis
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes231
Number of tRNAs40
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

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Persimmon_1

Persimmon_2

Persimmon_3

Persimmon_4

Persimmon_5

Persimmon_6
(Lsr2-like DNA bridging protein)

Persimmon_7

Persimmon_8

Persimmon_9
(ParB-like nuclease domain protein)

Persimmon_10

Persimmon_11

Persimmon_12

Persimmon_13

Persimmon_14

Persimmon_15

Persimmon_16

Persimmon_17

Persimmon_18

Persimmon_19

Persimmon_20

Persimmon_21
(HNH endonuclease)

Persimmon_22

Persimmon_23
(ThyX-like thymidylate synthase)

Persimmon_24

Persimmon_25

Persimmon_26

Persimmon_27

Persimmon_28

Persimmon_29

Persimmon_30

Persimmon_31

Persimmon_32 — tRNA
(tRNA-Thr(cgt))

Persimmon_33
(HNH endonuclease)

Persimmon_34
(glycosyltransferase)

Persimmon_35

Persimmon_36

Persimmon_37
(glycosyltransferase)

Persimmon_38
(ribonucleotide reductase)

Persimmon_39
(endolysin)

Persimmon_40
(HNH endonuclease)

Persimmon_41

Persimmon_42

Persimmon_43
(portal protein)

Persimmon_44

Persimmon_45
(capsid maturation protease)

Persimmon_46
(major capsid protein)

Persimmon_47

Persimmon_48
(head-to-tail adaptor)

Persimmon_49
(head-to-tail stopper)

Persimmon_50

Persimmon_51
(tail terminator)

Persimmon_52
(major tail protein)

Persimmon_53
(tail assembly chaperone)

Persimmon_54

Persimmon_55
(tape measure protein)

Persimmon_56

Persimmon_57
(minor tail protein)

Persimmon_58

Persimmon_59
(minor tail protein)

Persimmon_60
(minor tail protein)

Persimmon_61

Persimmon_62

Persimmon_63

Persimmon_64
(HNH endonuclease)

Persimmon_65
(metallophosphoesterase)

Persimmon_66

Persimmon_67

Persimmon_68
(helix-turn-helix DNA binding domain protein)

Persimmon_69

Persimmon_70

Persimmon_71

Persimmon_72
(DnaB-like dsDNA helicase)

Persimmon_73

Persimmon_74
(DNA primase)

Persimmon_75
(ssDNA binding protein)

Persimmon_76

Persimmon_77
(DnaE-like DNA polymerase III alpha)

Persimmon_78

Persimmon_79
(MazG-like nucleotide pyrophosphohydrolase)

Persimmon_80

Persimmon_81
(RecA-like DNA recombinase)

Persimmon_82

Persimmon_83
(Holliday junction resolvase)

Persimmon_84

Persimmon_85

Persimmon_86
(Cas4 exonuclease)

Persimmon_87

Persimmon_88
(RuvC-like resolvase)

Persimmon_89
(DprA-like ssDNA binding protein)

Persimmon_90
(helix-turn-helix DNA binding domain protein)

Persimmon_91
(methyltransferase)

Persimmon_92
(thymidylate kinase)

Persimmon_93

Persimmon_94
(Terminase small subunit)

Persimmon_95
(Terminase large subunit)

Persimmon_96
(HNH endonuclease)

Persimmon_97

Persimmon_98

Persimmon_99 — tRNA
(tRNA-Gly(tcc))

Persimmon_100 — tRNA
(tRNA-Gln(ctg))

Persimmon_101 — tRNA
(tRNA-Trp(cca))

Persimmon_102

Persimmon_103

Persimmon_104 — tRNA
(tRNA-Pro(tgg))

Persimmon_105 — tRNA
(tRNA-Pro(tgg))

Persimmon_106
(nucleotidyl transferase)

Persimmon_107
(FtsK-like DNA translocase)

Persimmon_108

Persimmon_109 — tRNA
(tRNA-Ile(tat))

Persimmon_110

Persimmon_111

Persimmon_112 — tRNA
(tRNA-Ser(gga))

Persimmon_113

Persimmon_114 — tRNA
(tRNA-Ser(tga))

Persimmon_115

Persimmon_116

Persimmon_117

Persimmon_118 — tRNA
(tRNA-Asp(gtc))

Persimmon_119

Persimmon_120
(RNA binding protein)

Persimmon_121 — tRNA
(tRNA-Asp(gtc))

Persimmon_122

Persimmon_123

Persimmon_124
(Ro-like RNA binding protein)

Persimmon_125

Persimmon_126

Persimmon_127

Persimmon_128

Persimmon_129

Persimmon_130

Persimmon_131

Persimmon_132 — tRNA
(tRNA-Glu(ctc))

Persimmon_133

Persimmon_134 — tRNA
(tRNA-Glu(ttc))

Persimmon_135

Persimmon_136 — tRNA
(tRNA-Val(tac))

Persimmon_137 — tRNA
(tRNA-Leu(tag))

Persimmon_138 — tRNA
(tRNA-Leu(tag))

Persimmon_139 — tRNA
(tRNA-Gly(gcc))

Persimmon_140 — tRNA
(tRNA-Arg(tct))

Persimmon_141
(HNH endonuclease)

Persimmon_142

Persimmon_143

Persimmon_144

Persimmon_145 — tRNA
(tRNA-Ala(tgc))

Persimmon_146 — tRNA
(tRNA-Lys(ctt))

Persimmon_147
(peptidase)

Persimmon_148

Persimmon_149 — tRNA
(tRNA-Asn(gtt))

Persimmon_150

Persimmon_151

Persimmon_152 — tRNA
(tRNA-Asn(gtt))

Persimmon_153

Persimmon_154

Persimmon_155 — tRNA
(tRNA-Arg(cct))

Persimmon_156 — tRNA
(tRNA-Ile(gat))

Persimmon_157 — tRNA
(tRNA-Ala(ggc))

Persimmon_158 — tRNA
(tRNA-Lys(ctt))

Persimmon_159
(HNH endonuclease)

Persimmon_160 — tRNA
(tRNA-Lys(ttt))

Persimmon_161
(HNH endonuclease)

Persimmon_162
(HNH endonuclease)

Persimmon_163

Persimmon_164

Persimmon_165 — tRNA
(tRNA-Met(cat))

Persimmon_166 — tRNA
(tRNA-Met(cat))

Persimmon_167

Persimmon_168

Persimmon_169

Persimmon_170 — tRNA
(tRNA-Tyr(gta))

Persimmon_171 — tRNA
(tRNA-His(gtg))

Persimmon_172 — tRNA
(tRNA-Phe(gaa))

Persimmon_173

Persimmon_174

Persimmon_175 — tRNA
(tRNA-Cys(gca))

Persimmon_176 — tRNA
(tRNA-Thr(tgt))

Persimmon_177 — tRNA
(tRNA-Thr(ggt))

Persimmon_178

Persimmon_179
(HNH endonuclease)

Persimmon_180

Persimmon_181
(DnaQ-like DNA polymerase III subunit)

Persimmon_182 — tmRNA
(Tag peptide: ANSKFAFALAA*)

Persimmon_183

Persimmon_184
(peptidase)

Persimmon_185
(histidine kinase)

Persimmon_186

Persimmon_187

Persimmon_188
(acetyltransferase)

Persimmon_189

Persimmon_190

Persimmon_191

Persimmon_192

Persimmon_193

Persimmon_194
(RNA ligase)

Persimmon_195

Persimmon_196

Persimmon_197

Persimmon_198
(polynucleotide kinase)

Persimmon_199
(HNH endonuclease)

Persimmon_200

Persimmon_201

Persimmon_202 — tRNA
(tRNA-Leu(gag))

Persimmon_203

Persimmon_204

Persimmon_205 — tRNA
(tRNA-Val(gac))

Persimmon_206

Persimmon_207

Persimmon_208 — tRNA
(tRNA-Leu(caa))

Persimmon_209

Persimmon_210
(Holliday junction resolvase)

Persimmon_211 — tRNA
(tRNA-Ser(gct))

Persimmon_212

Persimmon_213

Persimmon_214

Persimmon_215

Persimmon_216

Persimmon_217

Persimmon_218

Persimmon_219

Persimmon_220
(deoxycytidylate deaminase)

Persimmon_221
(rIIA-like protein)

Persimmon_222
(rIIB-like protein)

Persimmon_223
(phosphoesterase)

Persimmon_224

Persimmon_225

Persimmon_226
(WhiB family transcription factor)

Persimmon_227

Persimmon_228

Persimmon_229

Persimmon_230

Persimmon_231

Persimmon_232

Persimmon_233

Persimmon_234
(RNA binding protein)

Persimmon_235 — tRNA
(tRNA-Gln(ttg))

Persimmon_236

Persimmon_237

Persimmon_238

Persimmon_239

Persimmon_240

Persimmon_241

Persimmon_242
(thioredoxin)

Persimmon_243

Persimmon_244
(glycosylase)

Persimmon_245

Persimmon_246

Persimmon_247

Persimmon_248

Persimmon_249

Persimmon_250

Persimmon_251

Persimmon_252

Persimmon_253

Persimmon_254

Persimmon_255

Persimmon_256

Persimmon_257
(Lsr2-like DNA bridging protein)

Persimmon_258

Persimmon_259

Persimmon_260
(ParB-like nuclease domain protein)

Persimmon_261

Persimmon_262

Persimmon_263

Persimmon_264

Persimmon_265

Persimmon_266

Persimmon_267

Persimmon_268

Persimmon_269

Persimmon_270

Persimmon_271

Persimmon_272
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR253896
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload