| Detailed Information for Phage Pippa |
| Discovery Information |
| Isolation Host | Arthrobacter sp. ATCC 21022 |
| Found By | Claire Wentzlaff |
| Year Found | 2018 |
| Location Found | Waco, TX USA |
| Finding Institution | Baylor University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 26°C |
| GPS Coordinates | 31.546423 N, 97.119263 W Map |
| Discovery Notes | This phage was discovered on Baylor University campus in front of Morrison Hall. It had rained for 3 days prior to collection, so the soil was saturated under the Oak Tree. |
| Naming Notes | I named my phage after my freshman year roommate, Piper "Pippa" Cannon. She plans to name her first daughter Claire, so I thought it was fair that I name my first phage after her. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 8, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 1961 |
| Genome length (bp) | 50783 |
| Character of genome ends | Circularly Permuted |
| GC Content | 61.1% |
| Sequencing Notes | at position 22338 bp ~ 50% C instead of consensus T, 22359 bp 20% G to A, 33232 bp 30% G to A, 35109 bp 20% A to C, 41648 50% A to G |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AO |
| Subcluster | AO2 |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
|
| Annotating Institution | Baylor University |
| Annotation Status | In GenBank |
| Plaque Notes | The average plaque size was 1.1 mm. |
| Morphotype | Myoviridae |
| Number of Genes | 77 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MT889388 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
5x10^9 |
| Pitt Freezer Box# |
74 |
| Pitt Freezer Box Grid# |
F9 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
