Detailed Information for Phage Platte |
Discovery Information |
Isolation Host | Microbacterium paraoxydans NWU1 |
Found By | Annie Cooper |
Year Found | 2019 |
Location Found | Inglewood, NE United States |
Finding Institution | Nebraska Wesleyan University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 29°C |
GPS Coordinates | 41.4135 N, 96.5032 W Map |
Discovery Notes | near a garden that was impacted by the flooded river |
Naming Notes | found near the platte river when it flooded |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 26, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1421 |
Genome length (bp) | 62728 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 3180 bp |
GC Content | 64.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | ED |
Subcluster | ED1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | Nebraska Wesleyan University |
Annotation Status | In GenBank |
Plaque Notes | siphoviridae |
Morphotype | Siphoviridae |
Number of Genes | 113 |
Number of tRNAs | 4 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ622166 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.20x10^10 |
Pitt Freezer Box# |
110 |
Pitt Freezer Box Grid# |
B5 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |