Detailed Information for Phage Pumancara |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Carlos Guerrero |
Year Found | 2012 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 40.313242 N, 79.79379 W Map |
Discovery Notes | Isolated from soil by decaying leaf matter |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 20, 2013 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 184 |
Sanger Finishing Reactions | 37 |
Genome length (bp) | 42830 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | GCTTACCGTGATA |
GC Content | 61.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AK |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 61 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KU160661 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
5 |
Pitt Freezer Box Grid# |
A1 |
Available Files |
Plaque Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |