Detailed Information for Phage Pytheas |
Discovery Information |
Isolation Host | Gordonia terrae 3612 |
Found By | J. McCormack, E. O'Meara, G. Pal, and J. Shapira |
Year Found | 2020 |
Location Found | Pittsburgh, PA United States |
Finding Institution | University of Pittsburgh |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 40.444295 N, 79.956074 W Map |
Discovery Notes | discovered by Jamie McCormack, Erin O'Meara, Gurleen Pal, and Jake Shapira. Jake Shapira collected the soil sample. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 27, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 491 |
Genome length (bp) | 53520 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGTACGGCAT |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | CY |
Subcluster | -- |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Number of Genes | 83 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OP434460 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
126 |
Pitt Freezer Box Grid# |
B4 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |