Detailed Information for Phage RedFox |
Discovery Information |
Isolation Host | Arthrobacter globiformis B-2979 |
Found By | Juliana Magna, Gabrielle Rice |
Year Found | 2022 |
Location Found | Poughkeepsie, NY USA |
Finding Institution | Marist University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 41.7203 N, 73.9356 W Map |
Discovery Notes | Found in front of Champagnat Hall at Marist college under tree (moist soil). sample was collected when foggy outside so soil was a little moist. it was collected from surface. |
Naming Notes | Our school mascot is the RedFox, so in order to keep school spirit alive, we named our phage after him. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 11, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1400 |
Genome length (bp) | 38728 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 12 bases |
Overhang Sequence | GAGTTGCCGGCA |
GC Content | 66.1% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AS |
Subcluster | AS3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Marist University |
Annotation Status | In GenBank |
Plaque Notes | small, no halo, highly concentrated phage assay, from 2nd round of purification. |
Morphotype | Siphoviridae |
Number of Genes | 71 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR195049 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1 x 10^11 pfu/ml |
Pitt Freezer Box# |
153 |
Pitt Freezer Box Grid# |
C10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |