Arthrobacter phage RedFox
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Detailed Information for Phage RedFox
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByJuliana Magna, Gabrielle Rice
Year Found2022
Location FoundPoughkeepsie, NY USA
Finding InstitutionMarist University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates41.7203 N, 73.9356 W Map
Discovery NotesFound in front of Champagnat Hall at Marist college under tree (moist soil). sample was collected when foggy outside so soil was a little moist. it was collected from surface.
Naming NotesOur school mascot is the RedFox, so in order to keep school spirit alive, we named our phage after him.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1400
Genome length (bp)38728
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTTGCCGGCA
GC Content66.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS3
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionMarist University
Annotation StatusIn GenBank
Plaque Notessmall, no halo, highly concentrated phage assay, from 2nd round of purification.
MorphotypeSiphoviridae
Number of Genes71
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

RedFox_1
(DNA binding protein)

RedFox_2
(terminase large subunit)

RedFox_3
(RNA binding protein)

RedFox_4
(portal protein)

RedFox_5
(capsid maturation protease)

RedFox_6
(major capsid protein)

RedFox_7

RedFox_8
(head-to-tail adaptor)

RedFox_9
(head-to-tail stopper)

RedFox_10

RedFox_11
(tail terminator)

RedFox_12
(major tail protein)

RedFox_13
(tail assembly chaperone)

RedFox_14
(tail assembly chaperone)

RedFox_15
(tape measure protein)

RedFox_16
(minor tail protein)

RedFox_17
(minor tail protein)

RedFox_18
(minor tail protein)

RedFox_19
(minor tail protein)

RedFox_20

RedFox_21

RedFox_22
(endolysin)

RedFox_23
(holin)

RedFox_24

RedFox_25

RedFox_26
(helix-turn-helix DNA binding domain protein)

RedFox_27

RedFox_28

RedFox_29

RedFox_30
(HNH endonuclease)

RedFox_31
(helix-turn-helix DNA binding domain protein)

RedFox_32

RedFox_33

RedFox_34

RedFox_35

RedFox_36
(tyrosine integrase)

RedFox_37
(immunity repressor)

RedFox_38
(helix-turn-helix DNA binding domain protein)

RedFox_39
(excise)

RedFox_40
(RecE-like exonuclease)

RedFox_41
(RecT-like DNA pairing protein)

RedFox_42
(DNA methyltransferase)

RedFox_43
(DNA methyltransferase)

RedFox_44
(helix-turn-helix DNA binding domain protein)

RedFox_45
(RusA-like resolvase)

RedFox_46
(helix-turn-helix DNA binding domain protein)

RedFox_47
(DNA methyltransferase)

RedFox_48

RedFox_49

RedFox_50

RedFox_51

RedFox_52

RedFox_53

RedFox_54
(nucleoside deoxyribosyltransferase)

RedFox_55
(SSB protein)

RedFox_56
(NucT-like nuclease)

RedFox_57
(terminase small subunit)

RedFox_58

RedFox_59

RedFox_60

RedFox_61

RedFox_62

RedFox_63

RedFox_64

RedFox_65

RedFox_66

RedFox_67

RedFox_68

RedFox_69

RedFox_70
(MerR-like helix-turn-helix DNA binding domain protein)

RedFox_71
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR195049
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1 x 10^11 pfu/ml
Pitt Freezer Box# 153
Pitt Freezer Box Grid# C10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload