Detailed Information for Phage Riptide |
Discovery Information |
Isolation Host | Streptomyces mirabilis NRRL B-2400 |
Found By | Abdullah Shahzad & Nicholas Nguyen |
Year Found | 2024 |
Location Found | Odenton, MD United States of America |
Finding Institution | University of Maryland, Baltimore County |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | No |
Isolation Temperature | 30°C |
GPS Coordinates | 39.069053 N, 76.724572 W Map |
Discovery Notes | Found in a soil sample collected on September 4, 2024 from a garden bed in Odenton, Maryland. |
Naming Notes | Named after a sword from Percy Jackson |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 14, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1733 |
Genome length (bp) | 132142 |
Character of genome ends | Direct Terminal Repeat |
Direct Terminal Repeat Length | 10690 bp |
GC Content | 49.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | BE |
Subcluster | BE1 |
Cluster Life Cycle | Lytic |
Other Cluster Members |
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Annotating Institution | University of Maryland, Baltimore County |
Annotation Status | Being Annotated (Expected completion by 5/1/2025) |
Plaque Notes | Round with 3 mm diameter, and turbid appearance |
Morphotype | Siphoviridae |
Number of Genes | 237 |
Number of tRNAs | 41 |
Number of tmRNAs | 1 |
Has been Phamerated? | Yes |
Gene List |
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Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |