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Streptomyces phage Riptide
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Detailed Information for Phage Riptide
Discovery Information
Isolation HostStreptomyces mirabilis NRRL B-2400
Found ByAbdullah Shahzad & Nicholas Nguyen
Year Found2024
Location FoundOdenton, MD United States of America
Finding InstitutionUniversity of Maryland, Baltimore County
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature30°C
GPS Coordinates39.069053 N, 76.724572 W Map
Discovery NotesFound in a soil sample collected on September 4, 2024 from a garden bed in Odenton, Maryland.
Naming NotesNamed after a sword from Percy Jackson
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 14, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1733
Genome length (bp)132142
Character of genome endsDirect Terminal Repeat
Direct Terminal Repeat Length10690 bp
GC Content49.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterBE
SubclusterBE1
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUniversity of Maryland, Baltimore County
Annotation StatusBeing Annotated (Expected completion by 5/1/2025)
Plaque NotesRound with 3 mm diameter, and turbid appearance
MorphotypeSiphoviridae
Number of Genes237
Number of tRNAs41
Number of tmRNAs1
Has been Phamerated?Yes
Gene List

Click to View

Riptide_1

Riptide_2

Riptide_3

Riptide_4

Riptide_5

Riptide_6

Riptide_7

Riptide_8

Riptide_9

Riptide_10

Riptide_11

Riptide_12

Riptide_13

Riptide_14

Riptide_15

Riptide_16

Riptide_17

Riptide_18

Riptide_19

Riptide_20

Riptide_21

Riptide_22

Riptide_23

Riptide_24

Riptide_25

Riptide_26

Riptide_27

Riptide_28

Riptide_29

Riptide_30

Riptide_31

Riptide_32

Riptide_33

Riptide_34

Riptide_35 — tRNA
(gp35)

Riptide_36

Riptide_37

Riptide_38

Riptide_39

Riptide_40

Riptide_41

Riptide_42

Riptide_43

Riptide_44

Riptide_45

Riptide_46

Riptide_47

Riptide_48

Riptide_49

Riptide_50

Riptide_51

Riptide_52

Riptide_53

Riptide_54

Riptide_55

Riptide_56

Riptide_57

Riptide_58

Riptide_59

Riptide_60

Riptide_61

Riptide_62

Riptide_63

Riptide_64

Riptide_65

Riptide_66

Riptide_67

Riptide_68

Riptide_69

Riptide_70

Riptide_71

Riptide_72

Riptide_73

Riptide_74

Riptide_75

Riptide_76

Riptide_77

Riptide_78

Riptide_79

Riptide_80

Riptide_81

Riptide_82

Riptide_83

Riptide_84

Riptide_85

Riptide_86

Riptide_87

Riptide_88

Riptide_89

Riptide_90

Riptide_91

Riptide_92

Riptide_93

Riptide_94

Riptide_95

Riptide_96

Riptide_97 — tRNA
(gp97)

Riptide_98 — tRNA
(gp98)

Riptide_99 — tRNA
(gp99)

Riptide_100 — tRNA
(gp100)

Riptide_101 — tRNA
(gp101)

Riptide_102

Riptide_103

Riptide_104

Riptide_105 — tRNA
(gp105)

Riptide_106

Riptide_107

Riptide_108

Riptide_109

Riptide_110 — tRNA
(gp110)

Riptide_111

Riptide_112 — tRNA
(gp112)

Riptide_113

Riptide_114

Riptide_115

Riptide_116

Riptide_117 — tRNA
(gp117)

Riptide_118

Riptide_119

Riptide_120

Riptide_121

Riptide_122 — tRNA
(gp122)

Riptide_123

Riptide_124

Riptide_125

Riptide_126

Riptide_127

Riptide_128

Riptide_129

Riptide_130 — tRNA
(gp130)

Riptide_131

Riptide_132 — tRNA
(gp132)

Riptide_133

Riptide_134 — tRNA
(gp134)

Riptide_135 — tRNA
(gp135)

Riptide_136 — tRNA
(gp136)

Riptide_137 — tRNA
(gp137)

Riptide_138 — tRNA
(gp138)

Riptide_139

Riptide_140

Riptide_141

Riptide_142 — tRNA
(gp142)

Riptide_143 — tRNA
(gp143)

Riptide_144

Riptide_145

Riptide_146

Riptide_147 — tRNA
(gp147)

Riptide_148

Riptide_149

Riptide_150 — tRNA
(gp150)

Riptide_151

Riptide_152

Riptide_153 — tRNA
(gp153)

Riptide_154

Riptide_155 — tRNA
(gp155)

Riptide_156 — tRNA
(gp156)

Riptide_157 — tRNA
(gp157)

Riptide_158

Riptide_159

Riptide_160 — tRNA
(gp160)

Riptide_161

Riptide_162 — tRNA
(gp162)

Riptide_163

Riptide_164 — tRNA
(gp164)

Riptide_165

Riptide_166

Riptide_167

Riptide_168 — tRNA
(gp168)

Riptide_169

Riptide_170

Riptide_171 — tRNA
(gp171)

Riptide_172

Riptide_173

Riptide_174 — tRNA
(gp174)

Riptide_175 — tRNA
(gp175)

Riptide_176 — tRNA
(gp176)

Riptide_177

Riptide_178 — tRNA
(gp178)

Riptide_179

Riptide_180

Riptide_181 — tmRNA
(gp181)

Riptide_182

Riptide_183

Riptide_184

Riptide_185

Riptide_186

Riptide_187

Riptide_188

Riptide_189

Riptide_190

Riptide_191

Riptide_192

Riptide_193

Riptide_194

Riptide_195

Riptide_196

Riptide_197

Riptide_198

Riptide_199

Riptide_200

Riptide_201

Riptide_202

Riptide_203

Riptide_204

Riptide_205

Riptide_206

Riptide_207 — tRNA
(gp207)

Riptide_208

Riptide_209 — tRNA
(gp209)

Riptide_210

Riptide_211 — tRNA
(gp211)

Riptide_212 — tRNA
(gp212)

Riptide_213

Riptide_214 — tRNA
(gp214)

Riptide_215

Riptide_216

Riptide_217

Riptide_218

Riptide_219

Riptide_220

Riptide_221

Riptide_222

Riptide_223

Riptide_224

Riptide_225

Riptide_226

Riptide_227

Riptide_228

Riptide_229

Riptide_230

Riptide_231

Riptide_232

Riptide_233

Riptide_234

Riptide_235

Riptide_236

Riptide_237

Riptide_238 — tRNA
(gp238)

Riptide_239

Riptide_240

Riptide_241

Riptide_242

Riptide_243

Riptide_244

Riptide_245

Riptide_246

Riptide_247

Riptide_248

Riptide_249

Riptide_250

Riptide_251

Riptide_252

Riptide_253

Riptide_254

Riptide_255

Riptide_256

Riptide_257

Riptide_258

Riptide_259

Riptide_260

Riptide_261

Riptide_262

Riptide_263

Riptide_264

Riptide_265

Riptide_266

Riptide_267

Riptide_268

Riptide_269

Riptide_270

Riptide_271

Riptide_272

Riptide_273

Riptide_274

Riptide_275

Riptide_276

Riptide_277

Riptide_278

Riptide_279

Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload