| Detailed Information for Phage SKKY | |
| Discovery Information | |
| Isolation Host | Propionibacterium acnes ATCC 6919 |
| Former names | Phagey |
| Found By | Youna Kang |
| Year Found | 2012 |
| Location Found | Los Angeles, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Unavailable |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 34.065 N, 118.4425 W Map |
| Discovery Notes | Phage isolation and genome annotation performed by Karin Covarrubias, Youna Kang, Kimberly Yan, Sae Ho Song, and Kylie Wilson (UCLA). DNA preparation performed by Krisanavane Reddi (UCLA). Assembly performed by William Villella (UCLA) and confirmed by Charles Bowman (University of Pittsburgh). Quality control of annotation results performed by Jordan Moberg Parker and Dallas Mould (UCLA). |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 24, 2015 |
| Sequencing Facility | The UCLA Genotyping and Sequencing Core |
| Shotgun Sequencing Method | 454 Pyrosequencing |
| Approximate Shotgun Coverage | 99 |
| Genome length (bp) | 29594 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TCGTACGGCTT |
| GC Content | 54.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BU |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAquarius ATCC29399BC ATCC29399BT Attacne BruceLethal Cota DrParker Enochoraptor Enoki Keiki Kubed Lauchelly Leviosa LilBandit MEAK Moyashi MrAK Ouroboros P1.1 P100.1 P100A P100D P101A P104A P104B P105 P106A P106C P106I P106L P106M P107A P107C P108C P14.4 P9.1 PA6 PAD20 PAS50 Pirate Procrass1 QueenBey Rileysaurus SKKY Solid Stormborn Supernova Wizzo |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | Turbid plaques with halos; size ranged from 1-5 mm |
| Morphotype | Siphoviridae |
| Number of Genes | 47 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSKKY_1 SKKY_2 SKKY_3 SKKY_4 SKKY_5 SKKY_6 SKKY_7 SKKY_8 SKKY_9 SKKY_10 SKKY_11 SKKY_12 SKKY_13 SKKY_14 SKKY_15 SKKY_16 SKKY_17 SKKY_18 SKKY_19 SKKY_20 SKKY_21 SKKY_22 SKKY_23 SKKY_24 SKKY_25 SKKY_26 SKKY_27 SKKY_28 SKKY_29 SKKY_30 SKKY_31 SKKY_32 SKKY_33 SKKY_34 SKKY_35 SKKY_36 SKKY_37 SKKY_38 SKKY_39 SKKY_40 SKKY_41 SKKY_42 SKKY_43 SKKY_44 SKKY_45 SKKY_46 SKKY_47 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KR337648 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2011UCLAbruinVP |
| SEA Lysate Titer | 1.31x10^6 pfu/ml |
| Date of SEA Lysate Titering | Jun 4, 2012 |
| Available Files | |
| Plaque Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |