| Detailed Information for Phage Solid | |
| Discovery Information | |
| Isolation Host | Propionibacterium acnes ATCC 6919 |
| Former names | Katie Thure |
| Found By | Unavailable |
| Year Found | 2012 |
| Location Found | Los Angeles, CA USA |
| Finding Institution | University of California, Los Angeles |
| Program | Unavailable |
| From enriched soil sample? | No |
| Isolation Temperature | 37°C |
| GPS Coordinates | 34.065 N, 118.4425 W Map |
| Discovery Notes | Isolated from skin microcomedones (nose) Phage isolation and genome annotation performed by Kevin Cabrera, Katie Thure, Kylie Wilson, and Samantha Capati (UCLA). DNA preparation performed by Krisanavane Reddi (UCLA). Assembly performed by William Villella (UCLA) and confirmed by Charles Bowman (University of Pittsburgh). Quality control of annotation results performed by Jordan Moberg Parker and Dallas Mould (UCLA). |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | May 26, 2015 |
| Sequencing Facility | The UCLA Genotyping and Sequencing Core |
| Shotgun Sequencing Method | 454 Pyrosequencing |
| Approximate Shotgun Coverage | 65 |
| Genome length (bp) | 29440 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | TCGTACGGCTT |
| GC Content | 53.9% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | BU |
| Subcluster | -- |
| Cluster Life Cycle | Lytic |
| Other Cluster Members |
Click to ViewAquarius ATCC29399BC ATCC29399BT Attacne BruceLethal Cota DrParker Enochoraptor Enoki Keiki Kubed Lauchelly Leviosa LilBandit MEAK Moyashi MrAK Ouroboros P1.1 P100.1 P100A P100D P101A P104A P104B P105 P106A P106C P106I P106L P106M P107A P107C P108C P14.4 P9.1 PA6 PAD20 PAS50 Pirate Procrass1 QueenBey Rileysaurus SKKY Solid Stormborn Supernova Wizzo |
| Annotating Institution | Unknown or unassigned |
| Annotation Status | In GenBank |
| Plaque Notes | clear plaques; average diameter of 2-4 mm |
| Morphotype | Siphoviridae |
| Number of Genes | 45 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewSolid_1 Solid_2 Solid_3 Solid_4 Solid_5 Solid_6 Solid_7 Solid_8 Solid_9 Solid_10 Solid_11 Solid_12 Solid_13 Solid_14 Solid_15 Solid_16 Solid_17 Solid_18 Solid_19 Solid_20 Solid_21 Solid_22 Solid_23 Solid_24 Solid_25 Solid_26 Solid_27 Solid_28 Solid_29 Solid_30 Solid_31 Solid_32 Solid_33 Solid_34 Solid_35 Solid_36 Solid_37 Solid_38 Solid_39 Solid_40 Solid_41 Solid_42 Solid_43 Solid_44 Solid_45 |
| Publication Info | |
| Uploaded to GenBank? | Yes |
| GenBank Accession | KR337647 |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| SEA Designator | 2011UCLAbruinVP |
| SEA Lysate Titer | 3.025x10^5 |
| Date of SEA Lysate Titering | Jun 4, 2012 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| Final DNAMaster File | Download |
