Arthrobacter phage Toad24
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Detailed Information for Phage Toad24
Discovery Information
Isolation HostArthrobacter globiformis B-2979
Found ByAlyssa Tansek
Year Found2024
Location FoundPittsburgh, PA USA
Finding InstitutionChatham University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation Temperature31°C
GPS Coordinates40.44775 N, 79.92356 W Map
Naming NotesThis phage was found under a berry bush on a small brown mushroom. I named it Toad after the Mario Kart mushroom guy.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 3, 2025
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage1625
Genome length (bp)39825
Character of genome ends3' Sticky Overhang
Overhang Length12 bases
Overhang SequenceGAGTCGCCGGCA
GC Content66.9%
Fasta file available?Yes: Download fasta file
Characterization
ClusterAS
SubclusterAS1
Cluster Life CycleTemperate
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Number of Genes68
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Toad24_1

Toad24_2

Toad24_3
(terminase, small subunit)

Toad24_4
(terminase, large subunit)

Toad24_5
(RNA binding protein)

Toad24_6
(portal protein)

Toad24_7
(capsid maturation protease)

Toad24_8
(major capsid protein)

Toad24_9

Toad24_10
(head-to-tail adaptor)

Toad24_11
(head-to-tail stopper)

Toad24_12

Toad24_13
(tail terminator)

Toad24_14
(tail tube protein)

Toad24_15
(tail assembly chaperone)

Toad24_16
(tail assembly chaperone)

Toad24_17
(tape measure protein)

Toad24_18
(minor tail protein)

Toad24_19
(minor tail protein)

Toad24_20
(minor tail protein)

Toad24_21
(minor tail protein)

Toad24_22

Toad24_23

Toad24_24
(lysin A)

Toad24_25
(holin)

Toad24_26

Toad24_27

Toad24_28

Toad24_29

Toad24_30

Toad24_31
(HNH endonuclease)

Toad24_32
(helix-turn-helix DNA binding domain)

Toad24_33

Toad24_34

Toad24_35

Toad24_36
(tyrosine integrase)

Toad24_37
(immunity repressor)

Toad24_38
(helix-turn-helix DNA binding domain)

Toad24_39
(excise)

Toad24_40
(RecE-like exonuclease)

Toad24_41
(RecT-like DNA pairing protein)

Toad24_42
(DNA methyltransferase)

Toad24_43
(DNA methyltransferase)

Toad24_44
(helix-turn-helix DNA binding domain)

Toad24_45
(RusA-like resolvase)

Toad24_46
(helix-turn-helix DNA binding domain)

Toad24_47
(DNA methyltransferase)

Toad24_48

Toad24_49

Toad24_50

Toad24_51

Toad24_52

Toad24_53

Toad24_54

Toad24_55
(SSB protein)

Toad24_56
(NucT-like nuclease)

Toad24_57

Toad24_58
(small terminase-like protein)

Toad24_59

Toad24_60

Toad24_61

Toad24_62

Toad24_63

Toad24_64

Toad24_65

Toad24_66

Toad24_67
(helix-turn-helix DNA binding domain, MerR-like)

Toad24_68
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPX829713
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 199
Pitt Freezer Box Grid# G4
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload