| Detailed Information for Phage Whitney |
| Discovery Information |
| Isolation Host | Gordonia terrae 3612 |
| Found By | Makenna Romanelli |
| Year Found | 2019 |
| Location Found | Pittsburgh, PA United States of America |
| Finding Institution | University of Pittsburgh |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | 30°C |
| GPS Coordinates | 40.44 N, 79.95 W Map |
| Discovery Notes | The sample was collected from under a group of plants growing next to the sidewalk in Oakland, Pittsburgh, PA. The location had various rocks and weeds scattered throughout the soil, as well as the main plant. It was collected at 4 PM on September 11th, 2019. The soil felt fresh, almost damp, despite its location in the sun and the recent lack of rain. |
| Naming Notes | This name was inspired off of Whitney Houston. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 24, 2020 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 1200 |
| Genome length (bp) | 55784 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CTCGGGGCAT |
| GC Content | 63.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | DN |
| Subcluster | DN1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | St. Louis Community College |
| Annotation Status | In GenBank |
| Plaque Notes | Plaques are round, clear, and approximately 1-2 mm in diameter. |
| Morphotype | Siphoviridae |
| Number of Genes | 104 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MZ747510 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
115 |
| Pitt Freezer Box Grid# |
E8 |
| Available Files |
| Plaque Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
