| Detailed Information for Phage Yuma |
| Discovery Information |
| Isolation Host | Microbacterium foliorum NRRL B-24224 |
| Found By | Laura Millage |
| Year Found | 2020 |
| Location Found | Ames, IA United States |
| Finding Institution | Iowa State University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 42.014329 N, 93.681729 W Map |
| Discovery Notes | I took a sample of grass from right outside my apartment |
| Naming Notes | Yuma is the name of a town in Arizona, and also has some Russian origins. I mostly picked it because it sounded cool and was not already used. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 16, 2021 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 294 |
| Genome length (bp) | 62758 |
| Character of genome ends | Direct Terminal Repeat |
| Direct Terminal Repeat Length | 3707 bp |
| GC Content | 61.7% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | ED |
| Subcluster | ED2 |
| Cluster Life Cycle | Lytic |
| Lysogeny Notes | Because of the distinct clear plaques, I believe that this phage goes through the lytic cycle. |
| Other Cluster Members |
|
| Annotating Institution | Purdue University |
| Annotation Status | In GenBank |
| Plaque Notes | The plaques are medium size, round, and are very clear with defined edges. |
| Number of Genes | 120 |
| Number of tRNAs | 3 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | ON970603 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
129 |
| Pitt Freezer Box Grid# |
A2 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |