Mycobacterium phage YungJamal
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Detailed Information for Phage YungJamal
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByEddie Pacey
Year Found2012
Location FoundNorth Allegheny, Pittsburgh, PA USA
Finding InstitutionNorth Allegheny High School
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?No
Isolation TemperatureNot entered
GPS Coordinates40.575301 N, 80.028883 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 31, 2013
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIon Torrent
Approximate Shotgun Coverage295
Sanger Finishing Reactions15
Genome length (bp)70214
Character of genome ends3' Sticky Overhang
Overhang Length4 bases
Overhang SequenceGTCT
GC Content65.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterO
Subcluster--
Cluster Life CycleLytic
Other Cluster Members
Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes124
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKJ829260
Refseq NumberNone yet
Published in PaperPope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status Archived
Pitt Freezer Box# 3
Pitt Freezer Box Grid# D6
Available Files
Plaque PictureDownload
EM PictureDownload