| Detailed Information for Phage Atlantica | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Valerie Jackson |
| Year Found | 2024 |
| Location Found | Atlanta, GA United States of America |
| Finding Institution | Emory University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 33.79672 N, 84.32394 W Map |
| Discovery Notes | Sample was collected at an educational garden on Michael Street. The soil was shady, sandy, fairly dry, highly organic, and had no plant growth. |
| Naming Notes | It's a username I've always used for games and websites. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jan 13, 2025 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 9184 |
| Genome length (bp) | 38468 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | GAGTTGCCGGCA |
| GC Content | 66.1% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AS |
| Subcluster | AS3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAbidatro (AS1) Basilisk (AS1) Brynnie (AS1) Chickaboom (AS1) Eesa (AS1) Galaxy (AS1) Gravel (AS1) Jamun (AS1) KendraB23 (AS1) Orcanus (AS1) Pelletreau (AS1) Ruchi (AS1) TaylorSipht (AS1) Toad24 (AS1) Vulpecula (AS1) Westrich (AS1) WileyE (AS1) Amelia (AS2) Antrice (AS2) Bedetta (AS2) Bibble12 (AS2) Colusalem (AS2) Coral (AS2) Cote (AS2) Cygnet (AS2) Daob (AS2) HannahPhantana (AS2) Jerole (AS2) Kepler (AS2) Kuleana (AS2) LittleTokyo (AS2) Lunar (AS2) Melons (AS2) OtsoOtso (AS2) Polka (AS2) Zhuangyuan (AS2) AmiCi24 (AS3) Andrew (AS3) Atlantica (AS3) Babushka (AS3) Camara (AS3) DanHam62 (AS3) Glotell (AS3) HamCheese (AS3) Juno112 (AS3) KHumphrey (AS3) Leona (AS3) PhluffyCoco (AS3) Rattail (AS3) RedFox (AS3) Renna12 (AS3) StuartMinion (AS3) |
| Annotating Institution | Emory University |
| Annotation Status | Awaiting_QC |
| Plaque Notes | Plaques are about 1-2mm in diameter and are turbid, round with rough edges, and have a well-defined border. |
| Number of Genes | 71 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewAtlantica_1 Atlantica_2 Atlantica_3 Atlantica_4 Atlantica_5 Atlantica_6 Atlantica_7 Atlantica_8 Atlantica_9 Atlantica_10 Atlantica_11 Atlantica_12 Atlantica_13 Atlantica_14 Atlantica_15 Atlantica_16 Atlantica_17 Atlantica_18 Atlantica_19 Atlantica_20 Atlantica_21 Atlantica_22 Atlantica_23 Atlantica_24 Atlantica_25 Atlantica_26 Atlantica_27 Atlantica_28 Atlantica_29 Atlantica_30 Atlantica_31 Atlantica_32 Atlantica_33 Atlantica_34 Atlantica_35 Atlantica_36 Atlantica_37 Atlantica_38 Atlantica_39 Atlantica_40 Atlantica_41 Atlantica_42 Atlantica_43 Atlantica_44 Atlantica_45 Atlantica_46 Atlantica_47 Atlantica_48 Atlantica_49 Atlantica_50 Atlantica_51 Atlantica_52 Atlantica_53 Atlantica_54 Atlantica_55 Atlantica_56 Atlantica_57 Atlantica_58 Atlantica_59 Atlantica_60 Atlantica_61 Atlantica_62 Atlantica_63 Atlantica_64 Atlantica_65 Atlantica_66 Atlantica_67 Atlantica_68 Atlantica_69 Atlantica_70 Atlantica_71 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 195 |
| Pitt Freezer Box Grid# | D3 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
