Detailed Information for Phage CallieOMalley |
Discovery Information |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Former names | TCO007 |
Found By | Hailey Bui and Selina Husain |
Year Found | 2016 |
Location Found | Northampton, MA USA |
Finding Institution | Smith College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 42.319714 N, 72.637491 W Map |
Discovery Notes | Our soil sample was collected at 12:54pm by a tree next to Hatfield Hall. Approximately 1 inch deep. Soil was dark in color, contained a lot of plant material and tiny green beads of unknown substance. Consistency was loose, and the soil was slightly moist. |
Naming Notes | The Chosen One - 007 |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 6, 2017 |
Sequencing Facility | Smith College |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 3876 |
Genome length (bp) | 43862 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 13 bases |
Overhang Sequence | GGTAACCGTGATA |
GC Content | 61.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | AK |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Plaque Notes | Consistent morphology, clear (non-turbid), 0.25-1mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 62 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK112535 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
32 |
Pitt Freezer Box Grid# |
D6 |
Available Files |
Plaque Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |