Detailed Information for Phage Elkhorn | |
Discovery Information | |
Isolation Host | Arthrobacter sp. ATCC 21022 |
Found By | Jacey Hilbers |
Year Found | 2015 |
Location Found | Waco, TX USA |
Finding Institution | Baylor University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 31.5475 N, 97.113 W Map |
Discovery Notes | Soil was collected by Grant Schutte in a tree grove outside of the Baylor Sciences Building. Collection was taken at a depth of about two inches. Soil was from a high traffic walking area with contaminates of chalk and bird feces. |
Naming Notes | Named after Elkhorn High School in Nebraska. |
Sequencing Information | |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 8, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 6590 |
Genome length (bp) | 15556 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CCCGCGCCACC |
GC Content | 59.6% |
Fasta file available? | Yes: Download fasta file |
Characterization | |
Cluster | AN |
Subcluster | -- |
Cluster Life Cycle | Lytic |
Other Cluster Members |
Click to View |
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Plaques of multiple morphologies, concentration dependent |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
Click to ViewElkhorn_1 Elkhorn_2 Elkhorn_3 Elkhorn_4 Elkhorn_5 Elkhorn_6 Elkhorn_7 Elkhorn_8 Elkhorn_9 Elkhorn_10 Elkhorn_11 Elkhorn_12 Elkhorn_13 Elkhorn_14 Elkhorn_15 Elkhorn_16 Elkhorn_17 Elkhorn_18 Elkhorn_19 Elkhorn_20 Elkhorn_21 Elkhorn_22 Elkhorn_23 Elkhorn_24 Elkhorn_25 Elkhorn_26 |
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info | |
Uploaded to GenBank? | Yes |
GenBank Accession | MF140409 |
Refseq Number | None yet |
Archiving Info | |
Archiving status | Archived |
Pitt Freezer Box# | 21 |
Pitt Freezer Box Grid# | C12 |
Available Files | |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |