Gordonia phage GOATification
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Detailed Information for Phage GOATification
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByAlexandra Kosmicki and Aiden Hauff
Year Found2022
Location FoundLincoln, NE USA
Finding InstitutionUniversity of Nebraska-Lincoln
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?No
Isolation Temperature35°C
GPS Coordinates40.77965 N, 96.63385 W Map
Discovery NotesThe soil sample came from Holmes Lake in Lincoln, NE right on the shore by the main boating ramp. I took soil from the lakebed right before the water starts. The soil was sandy, wet, and contained moss. I took from the surface to about 3 inches down of soil.
Naming NotesWe named this phage TheGoat because Goat stands for greatest of all time and our phage has acted amazing for us thus far hence why it is the greatest of all time (goat).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 11, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage512
Genome length (bp)67607
Character of genome endsCircularly Permuted
GC Content58.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Nebraska-Lincoln
Annotation StatusIn GenBank
Plaque NotesThe plaques made by this phage are small (approximately d=1mm), circular, clear plaques. Thay are not cloudy and do not contain halos.
Has been Phamerated?Yes
Gene List

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GOATification_1

GOATification_2
(terminase)

GOATification_3
(portal protein)

GOATification_4
(esterase)

GOATification_5
(esterase)

GOATification_6

GOATification_7

GOATification_8

GOATification_9

GOATification_10

GOATification_11

GOATification_12
(metalloprotease)

GOATification_13

GOATification_14

GOATification_15
(minor capsid protein)

GOATification_16
(major capsid protein)

GOATification_17

GOATification_18

GOATification_19

GOATification_20
(head-to-tail stopper)

GOATification_21
(minor capsid protein)

GOATification_22
(tail terminator)

GOATification_23

GOATification_24

GOATification_25
(major tail protein)

GOATification_26

GOATification_27

GOATification_28
(tape measure protein)

GOATification_29
(minor tail protein)

GOATification_30
(minor tail protein)

GOATification_31
(minor tail protein)

GOATification_32

GOATification_33

GOATification_34

GOATification_35

GOATification_36

GOATification_37
(lysin A)

GOATification_38

GOATification_39

GOATification_40

GOATification_41

GOATification_42

GOATification_43

GOATification_44

GOATification_45

GOATification_46

GOATification_47

GOATification_48

GOATification_49

GOATification_50

GOATification_51

GOATification_52

GOATification_53

GOATification_54

GOATification_55

GOATification_56

GOATification_57

GOATification_58

GOATification_59

GOATification_60
(DNA helicase)

GOATification_61

GOATification_62

GOATification_63

GOATification_64

GOATification_65
(Cas4 exonuclease)

GOATification_66

GOATification_67
(DNA primase/helicase)

GOATification_68

GOATification_69
(oxidoreductase)

GOATification_70
(nucleotide pyrophosphohydrolase)

GOATification_71

GOATification_72

GOATification_73
(methyltransferase)

GOATification_74

GOATification_75
(oxidoreductase)

GOATification_76

GOATification_77

GOATification_78
(DnaE-like DNA polymerase III alpha)

GOATification_79
(MazG-like nucleotide pyrophosphohydrolase)

GOATification_80

GOATification_81

GOATification_82
(ThyX-like thymidylate synthase)

GOATification_83

GOATification_84
(RuvC-like resolvase)

GOATification_85
(lysin B)

GOATification_86

GOATification_87
(DNA primase/polymerase)

GOATification_88

GOATification_89

GOATification_90

GOATification_91

GOATification_92

GOATification_93

GOATification_94

GOATification_95

GOATification_96

GOATification_97

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR521062
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 153
Pitt Freezer Box Grid# E1
Available Files
GenBank File for PhameratorDownload