Gordonia phage Patos
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Detailed Information for Phage Patos
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByAmalia Nunes, Elias Morales, Audrey DeGraw
Year Found2021
Location FoundAlbany, NY United States of America
Finding InstitutionAlbany College of Pharmacy and Health Sciences
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature19°C
GPS Coordinates42.644879 N, 73.76418 W Map
Discovery NotesWe found this phage in a construction site in Lincoln Park, Albany. It was found on the surface of tire tracks. The sample was difficult to remove as it was solidified and stuck with other dirt that was around. This sample was taken around an inch deep. It was 18.89 degrees Celsius when taken.
Naming NotesPatos is ducks in Portuguese and Spanish which is two of the languages that two of the group members speak. This name is based on the fact that a sample from a duck pond contaminated the the majority of our samples during our research. We chose this name based on this memorable experience in our research.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 9, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage4358
Genome length (bp)68847
Character of genome endsCircularly Permuted
GC Content58.2%
Fasta file available?Yes: Download fasta file
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionAlbany College of Pharmacy and Health Sciences
Annotation StatusIn GenBank
Plaque NotesThe titer of the phage is 1.5*10^12 pfu/ml. It is a clear plaque.
Has been Phamerated?Yes
Gene List
Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOP172876
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 136
Pitt Freezer Box Grid# D12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload