Gordonia phage GretelLyn
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Detailed Information for Phage GretelLyn
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Found ByMichael Lauer
Year Found2018
Location FoundPittsburgh, PA USA
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.447276 N, 79.953995 W Map
Discovery NotesFound in the flower bed outside of Crawford Hall at the University of Pittsburgh. Soil was taken from the base of the roots of begonia flowers.
Naming NotesNamed after a German Shepherd dog.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 24, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1136
Genome length (bp)67605
Character of genome endsCircularly Permuted
GC Content58.1%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesClear plaques that are small and circular, as if they were specs.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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GretelLyn_1

GretelLyn_2
(terminase)

GretelLyn_3
(portal protein)

GretelLyn_4
(lipase)

GretelLyn_5
(esterase)

GretelLyn_6

GretelLyn_7

GretelLyn_8

GretelLyn_9

GretelLyn_10

GretelLyn_11
(metalloprotease)

GretelLyn_12
(MuF-like minor capsid protein)

GretelLyn_13

GretelLyn_14

GretelLyn_15
(major capsid protein)

GretelLyn_16

GretelLyn_17

GretelLyn_18

GretelLyn_19
(head-to-tail stopper)

GretelLyn_20

GretelLyn_21
(tail terminator)

GretelLyn_22

GretelLyn_23

GretelLyn_24
(major capsid protein)

GretelLyn_25

GretelLyn_26

GretelLyn_27
(tape measure protein)

GretelLyn_28
(minor tail protein)

GretelLyn_29
(minor tail protein)

GretelLyn_30
(minor tail protein)

GretelLyn_31

GretelLyn_32

GretelLyn_33

GretelLyn_34

GretelLyn_35

GretelLyn_36
(lysin A)

GretelLyn_37

GretelLyn_38

GretelLyn_39

GretelLyn_40

GretelLyn_41

GretelLyn_42

GretelLyn_43

GretelLyn_44

GretelLyn_45

GretelLyn_46

GretelLyn_47

GretelLyn_48

GretelLyn_49

GretelLyn_50

GretelLyn_51

GretelLyn_52

GretelLyn_53

GretelLyn_54

GretelLyn_55

GretelLyn_56

GretelLyn_57

GretelLyn_58

GretelLyn_59

GretelLyn_60
(DNA helicase)

GretelLyn_61

GretelLyn_62

GretelLyn_63

GretelLyn_64

GretelLyn_65
(Cas4 family exonuclease)

GretelLyn_66

GretelLyn_67
(RecA-like DNA recombinase)

GretelLyn_68

GretelLyn_69

GretelLyn_70
(nucleotide pyrophosphohydrolase)

GretelLyn_71

GretelLyn_72

GretelLyn_73
(methyltransferase)

GretelLyn_74

GretelLyn_75
(oxidoreductase)

GretelLyn_76

GretelLyn_77

GretelLyn_78

GretelLyn_79
(DnaE-like DNA polymerase III)

GretelLyn_80
(MazG-like nucleotide pyrophosphohydrolase)

GretelLyn_81

GretelLyn_82

GretelLyn_83
(ThyX-like thymidylate synthase)

GretelLyn_84

GretelLyn_85
(RuvC-like resolvase)

GretelLyn_86
(lysin B)

GretelLyn_87

GretelLyn_88
(DNA primase/polymerase)

GretelLyn_89

GretelLyn_90

GretelLyn_91

GretelLyn_92

GretelLyn_93

GretelLyn_94

GretelLyn_95

GretelLyn_96

GretelLyn_97

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234162
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 96
Pitt Freezer Box Grid# G6
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload