Gordonia phage NovaSharks
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Detailed Information for Phage NovaSharks
Discovery Information
Isolation HostGordonia rubripertincta NRRL B-16540
Former namesNovasharks
Found ByMelissa Bell
Year Found2021
Location FoundDavie, FL United States
Finding InstitutionNova Southeastern University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature30°C
GPS Coordinates26.076111 N, 80.243306 W Map
Discovery NotesThe soil sample was collected from outside of a dorm building on the campus of Nova Southeastern University. It had rained the night before so the soil was more wet than dry, despite me digging down about 4 inches. The weather was warm at the time, about 30 degrees celsius. There are known to be muscovy ducks, iguanas, and cats nearby, making it prime for many types of viruses.
Naming NotesOur discovery team attends nova southeastern university and our school mascot is Razor the shark.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJan 24, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1017
Genome length (bp)65274
Character of genome endsCircularly Permuted
GC Content57.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterDV
Subcluster--
Cluster Life CycleUnknown
Other Cluster Members
Annotating InstitutionNova Southeastern University
Annotation StatusIn GenBank
Plaque NotesThe phage can be deemed as slow growing because of how little plaques can be seen on the original plaque assay. The plaques are also quite small and very circular.
Has been Phamerated?Yes
Gene List

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NovaSharks_1

NovaSharks_2
(terminase)

NovaSharks_3
(portal protein)

NovaSharks_4

NovaSharks_5

NovaSharks_6

NovaSharks_7

NovaSharks_8

NovaSharks_9

NovaSharks_10

NovaSharks_11
(minor capsid protein)

NovaSharks_12

NovaSharks_13

NovaSharks_14
(major capsid protein)

NovaSharks_15
(DNA binding protein)

NovaSharks_16

NovaSharks_17

NovaSharks_18
(head-to-tail stopper)

NovaSharks_19

NovaSharks_20
(tail terminator)

NovaSharks_21

NovaSharks_22

NovaSharks_23
(major tail protein)

NovaSharks_24

NovaSharks_25

NovaSharks_26
(tape measure protein)

NovaSharks_27
(minor tail protein)

NovaSharks_28
(minor tail protein)

NovaSharks_29
(minor tail protein)

NovaSharks_30

NovaSharks_31

NovaSharks_32

NovaSharks_33

NovaSharks_34

NovaSharks_35

NovaSharks_36
(lysin A)

NovaSharks_37

NovaSharks_38

NovaSharks_39

NovaSharks_40

NovaSharks_41

NovaSharks_42

NovaSharks_43

NovaSharks_44

NovaSharks_45

NovaSharks_46

NovaSharks_47

NovaSharks_48

NovaSharks_49

NovaSharks_50

NovaSharks_51

NovaSharks_52

NovaSharks_53

NovaSharks_54

NovaSharks_55

NovaSharks_56

NovaSharks_57

NovaSharks_58

NovaSharks_59

NovaSharks_60

NovaSharks_61

NovaSharks_62
(DNA helicase)

NovaSharks_63

NovaSharks_64

NovaSharks_65

NovaSharks_66

NovaSharks_67
(Cas4 family exonuclease)

NovaSharks_68

NovaSharks_69
(RecA-like DNA recombinase)

NovaSharks_70

NovaSharks_71
(oxidoreductase)

NovaSharks_72
(hydrolase)

NovaSharks_73

NovaSharks_74
(methyltransferase)

NovaSharks_75

NovaSharks_76
(oxidoreductase)

NovaSharks_77

NovaSharks_78

NovaSharks_79

NovaSharks_80
(DnaE-like DNA polymerase III)

NovaSharks_81
(MazG-like nucleotide pyrophosphohydrolase)

NovaSharks_82

NovaSharks_83

NovaSharks_84
(ThyX-like thymidylate synthase)

NovaSharks_85
(RuvC-like resolvase)

NovaSharks_86
(lysin B)

NovaSharks_87

NovaSharks_88
(DNA primase/polymerase)

NovaSharks_89

NovaSharks_90

NovaSharks_91

NovaSharks_92

NovaSharks_93

NovaSharks_94

NovaSharks_95

NovaSharks_96

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON755187
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 138
Pitt Freezer Box Grid# G11
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload