| Detailed Information for Phage HamCheese | |
| Discovery Information | |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Sheridan Publico |
| Year Found | 2024 |
| Location Found | Raleigh, NC United States |
| Finding Institution | North Carolina State University |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 35.891502 N, 78.536568 W Map |
| Discovery Notes | Found in a low, grassy area beneath a bird feeder with shade at the time of soil retrieval. Temperature was 71 degrees Fahrenheit with 58% humidity. Sample was retrieved 8/21/2024 at 11:42am. |
| Naming Notes | The name I chose is a nickname for me and my amazing boyfriend. |
| Sequencing Information | |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 14, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 4812 |
| Genome length (bp) | 38454 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | GAGTTGCCGGCA |
| GC Content | 66.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization | |
| Cluster | AS |
| Subcluster | AS3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
Click to ViewAbidatro (AS1) Basilisk (AS1) Brynnie (AS1) Chickaboom (AS1) Eesa (AS1) Galaxy (AS1) Gravel (AS1) Jamun (AS1) KendraB23 (AS1) Orcanus (AS1) Pelletreau (AS1) Ruchi (AS1) TaylorSipht (AS1) Toad24 (AS1) Vulpecula (AS1) Westrich (AS1) WileyE (AS1) Amelia (AS2) Antrice (AS2) Bedetta (AS2) Bibble12 (AS2) Colusalem (AS2) Coral (AS2) Cote (AS2) Cygnet (AS2) Daob (AS2) HannahPhantana (AS2) Jerole (AS2) Kepler (AS2) Kuleana (AS2) LittleTokyo (AS2) Lunar (AS2) Melons (AS2) OtsoOtso (AS2) Polka (AS2) Zhuangyuan (AS2) AmiCi24 (AS3) Andrew (AS3) Atlantica (AS3) Babushka (AS3) Camara (AS3) DanHam62 (AS3) Glotell (AS3) HamCheese (AS3) Juno112 (AS3) KHumphrey (AS3) Leona (AS3) PhluffyCoco (AS3) Rattail (AS3) RedFox (AS3) Renna12 (AS3) StuartMinion (AS3) |
| Annotating Institution | North Carolina State University |
| Annotation Status | Awaiting_QC |
| Plaque Notes | Small, clear, 1mm plaques. |
| Morphotype | Siphoviridae |
| Number of Genes | 68 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
Click to ViewHamCheese_1 HamCheese_2 HamCheese_3 HamCheese_4 HamCheese_5 HamCheese_6 HamCheese_7 HamCheese_8 HamCheese_9 HamCheese_10 HamCheese_11 HamCheese_12 HamCheese_13 HamCheese_14 HamCheese_15 HamCheese_16 HamCheese_17 HamCheese_18 HamCheese_19 HamCheese_20 HamCheese_21 HamCheese_22 HamCheese_23 HamCheese_24 HamCheese_25 HamCheese_26 HamCheese_27 HamCheese_28 HamCheese_29 HamCheese_30 HamCheese_31 HamCheese_32 HamCheese_33 HamCheese_34 HamCheese_35 HamCheese_36 HamCheese_37 HamCheese_38 HamCheese_39 HamCheese_40 HamCheese_41 HamCheese_42 HamCheese_43 HamCheese_44 HamCheese_45 HamCheese_46 HamCheese_47 HamCheese_48 HamCheese_49 HamCheese_50 HamCheese_51 HamCheese_52 HamCheese_53 HamCheese_54 HamCheese_55 HamCheese_56 HamCheese_57 HamCheese_58 HamCheese_59 HamCheese_60 HamCheese_61 HamCheese_62 HamCheese_63 HamCheese_64 HamCheese_65 HamCheese_66 HamCheese_67 HamCheese_68 |
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info | |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info | |
| Archiving status | Archived |
| Pitt Freezer Box# | 195 |
| Pitt Freezer Box Grid# | C2 |
| Available Files | |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
