| Detailed Information for Phage HamCheese |
| Discovery Information |
| Isolation Host | Arthrobacter globiformis B-2979 |
| Found By | Sheridan Publico |
| Year Found | 2024 |
| Location Found | Raleigh, NC United States |
| Finding Institution | North Carolina State University |
| Program | Phage Hunters Integrating Research and Education |
| From enriched soil sample? | Yes |
| Isolation Temperature | 30°C |
| GPS Coordinates | 35.891502 N, 78.536568 W Map |
| Discovery Notes | Found in a low, grassy area beneath a bird feeder with shade at the time of soil retrieval. Temperature was 71 degrees Fahrenheit with 58% humidity. Sample was retrieved 8/21/2024 at 11:42am. |
| Naming Notes | The name I chose is a nickname for me and my amazing boyfriend. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Dec 14, 2024 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina NextSeq 1000 |
| Read Type | Single-end reads |
| Read Length | 100 bp |
| Approximate Shotgun Coverage | 4812 |
| Genome length (bp) | 38454 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 12 bases |
| Overhang Sequence | GAGTTGCCGGCA |
| GC Content | 66.0% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | AS |
| Subcluster | AS3 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | North Carolina State University |
| Annotation Status | In GenBank |
| Plaque Notes | Small, clear, 1mm plaques. |
| Morphotype | Siphoviridae |
| Number of Genes | 69 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PV876944 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
195 |
| Pitt Freezer Box Grid# |
C2 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
